| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933825
Identifier: 187933825
GI number: 187933825
Start: 290413
End: 291399
Strand: Reverse
Name: 187933825
Synonym: CLL_A0292
Alternate gene names: NA
Gene position: 291399-290413 (Counterclockwise)
Preceding gene: 187933612
Following gene: 187935089
Centisome position: 7.67
GC content: 20.16
Gene sequence:
>987_bases ATGATAAACTTTTCAATAGATAAAAAATTTTTTAAAATCATAAGTTTATTATGTGGTTTATTTATATTAATACTTATATT ATTAACGTTATTTTTTAAAAATACTGAACTAAATAAAATAAATAAAATTTCTAAGACCATCGTAACTATAAATTCATCAT TAAAATTGGATGAAAATGATGCCACACTTGATTTTAAAAATACAAAACAAATTTTAAACGAAAACTTAAATCTACTAAAT TCATTAGATAATAATCTAACTAATTTAACTTTAAAAAAATCTGATTCTAATGAATTAAAAGGCAATCTTTCAAATTACTT AAAACTAAATATTAATTTATATAATTCTATTATTTCTATAATAAATAATAAAAATAATGAAAACTTTCAATCATTATATC AAGACCTAATAAAAAATGAGGAAGCTTTAACTAAAGAAACAGATAAATTATCTGAATCTGGAGTTAAAATATCTATTCCA AAAAGCTTAAATAAATTCTTTATAAGCTTAAATAGATCTTTAAATGAATCCTATAAATCAATTAGAGAGAGTGATATTAT AAGTGAGCAGAAACGTGATTTTTTTGTACAAATTAACGATTTATTAAATAATTTTTCTGGCCTAAAGGATGATGTCAAAC CTGCATTAGAAAAAATAAGGGAAGACAATAGAGATTTATCTATAGTAATTTATGATATTAATGAAAAACGCTCAAATTTT AATACAATAAAAGATAGTTCTATATCTATTTCTATTCCAGTTGGTGGTGAAAATTGTTACGAAGCTTTAGAGGAGATTAT TGCTTCATATGATTCTTATATTAATTCTTTAGAAAAGAATATTAAAAATGAGATGAATTTACGTGATAAATCTAAATTAA CTTTAAATAATATTGATGAATTATATACTGATACTTTTGATAAATATGATTATTTTTTAAGTTGTTTTGATAATTTACAA AAGGCCATATTATCATATAAACATTAA
Upstream 100 bases:
>100_bases TAAAAATTCATTATTTTTATAATAATTTTCTAATTAACATAATATAAGTAATATTAAGTAACTAAAAATATATTATTACT TAATAAGGGGGACTCTGGTT
Downstream 100 bases:
>100_bases TTTATGTATATAAGACTCTTTTTGGGCAATAATATTATTGGTTTGAAATATACCAGAGGAGGATTTTTAATGAAAAAAAT ATATAGCCTTTTCATAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MINFSIDKKFFKIISLLCGLFILILILLTLFFKNTELNKINKISKTIVTINSSLKLDENDATLDFKNTKQILNENLNLLN SLDNNLTNLTLKKSDSNELKGNLSNYLKLNINLYNSIISIINNKNNENFQSLYQDLIKNEEALTKETDKLSESGVKISIP KSLNKFFISLNRSLNESYKSIRESDIISEQKRDFFVQINDLLNNFSGLKDDVKPALEKIREDNRDLSIVIYDINEKRSNF NTIKDSSISISIPVGGENCYEALEEIIASYDSYINSLEKNIKNEMNLRDKSKLTLNNIDELYTDTFDKYDYFLSCFDNLQ KAILSYKH
Sequences:
>Translated_328_residues MINFSIDKKFFKIISLLCGLFILILILLTLFFKNTELNKINKISKTIVTINSSLKLDENDATLDFKNTKQILNENLNLLN SLDNNLTNLTLKKSDSNELKGNLSNYLKLNINLYNSIISIINNKNNENFQSLYQDLIKNEEALTKETDKLSESGVKISIP KSLNKFFISLNRSLNESYKSIRESDIISEQKRDFFVQINDLLNNFSGLKDDVKPALEKIREDNRDLSIVIYDINEKRSNF NTIKDSSISISIPVGGENCYEALEEIIASYDSYINSLEKNIKNEMNLRDKSKLTLNNIDELYTDTFDKYDYFLSCFDNLQ KAILSYKH >Mature_328_residues MINFSIDKKFFKIISLLCGLFILILILLTLFFKNTELNKINKISKTIVTINSSLKLDENDATLDFKNTKQILNENLNLLN SLDNNLTNLTLKKSDSNELKGNLSNYLKLNINLYNSIISIINNKNNENFQSLYQDLIKNEEALTKETDKLSESGVKISIP KSLNKFFISLNRSLNESYKSIRESDIISEQKRDFFVQINDLLNNFSGLKDDVKPALEKIREDNRDLSIVIYDINEKRSNF NTIKDSSISISIPVGGENCYEALEEIIASYDSYINSLEKNIKNEMNLRDKSKLTLNNIDELYTDTFDKYDYFLSCFDNLQ KAILSYKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37896; Mature: 37896
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINFSIDKKFFKIISLLCGLFILILILLTLFFKNTELNKINKISKTIVTINSSLKLDEND CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCEEECCCC ATLDFKNTKQILNENLNLLNSLDNNLTNLTLKKSDSNELKGNLSNYLKLNINLYNSIISI CEECHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHCCCCCEEEEEHHHHHHHHHH INNKNNENFQSLYQDLIKNEEALTKETDKLSESGVKISIPKSLNKFFISLNRSLNESYKS HCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHH IRESDIISEQKRDFFVQINDLLNNFSGLKDDVKPALEKIREDNRDLSIVIYDINEKRSNF HHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC NTIKDSSISISIPVGGENCYEALEEIIASYDSYINSLEKNIKNEMNLRDKSKLTLNNIDE CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LYTDTFDKYDYFLSCFDNLQKAILSYKH HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MINFSIDKKFFKIISLLCGLFILILILLTLFFKNTELNKINKISKTIVTINSSLKLDEND CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCEEECCCC ATLDFKNTKQILNENLNLLNSLDNNLTNLTLKKSDSNELKGNLSNYLKLNINLYNSIISI CEECHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHCCCCCEEEEEHHHHHHHHHH INNKNNENFQSLYQDLIKNEEALTKETDKLSESGVKISIPKSLNKFFISLNRSLNESYKS HCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHH IRESDIISEQKRDFFVQINDLLNNFSGLKDDVKPALEKIREDNRDLSIVIYDINEKRSNF HHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC NTIKDSSISISIPVGGENCYEALEEIIASYDSYINSLEKNIKNEMNLRDKSKLTLNNIDE CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LYTDTFDKYDYFLSCFDNLQKAILSYKH HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA