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The map label for this gene is 187933820

Identifier: 187933820

GI number: 187933820

Start: 2058886

End: 2059458

Strand: Reverse

Name: 187933820

Synonym: CLL_A1979

Alternate gene names: NA

Gene position: 2059458-2058886 (Counterclockwise)

Preceding gene: 187934812

Following gene: 187935329

Centisome position: 54.19

GC content: 32.98

Gene sequence:

>573_bases
ATGTCTATATATTTTGATGTCAAAACTATTAGAGAACTTATAGGAGATAATTATAGAGAACAAAGAGAATTTACATTAGA
AGAATTAGCACAATATGATGGAAGTAACGGAAAACCTGCTTATGTGGCCATAGAAGGTATAGTTTATGATTTAAGCGAAA
AAGCAGTTTGGGCTAACGGAACACATTTTGGACTTACAGCAGGTAAAGATTTAACAGAACAATTCAAATCGTGTCATGGA
GCGCCTAAATTTTTAAGTACCCTACCTAAAGTTGGGATACTTAAAGCAAATAATAGAATGAATACTGTAACTATGAACAG
AAGTGAAATACAAAACAAATCTAACTTTACTCCTGATGATTGGGTTAGATATATTACCCCATTAGTTAATCGTGCATTGG
CAGAAGCTAAGGCAGGAATTAATCCAGAACATTTATATCAGGAATTTATTTTATCAGGTGTACTTGTAGGATTAGGAAAA
ACTCCTCAAGAAGCTATTGAACAGGTTGAAGAATGGGAAAAGACAGGAGTATCAAAGTTATTGGCAATGAGTAAGATGAA
CAGATTTTATTAG

Upstream 100 bases:

>100_bases
ATTTGAGAAAAAATGGATATTTAGAATTTAAAAAAGAATATTTAAACATTTACTAGTTTTAAACTATACTAATATAGAGA
AAAATATTTGCGAGGTAGAG

Downstream 100 bases:

>100_bases
TACTATTAAGTAAAATTGTTGAATAAGCAATGTAGCAAACAATGACTTTGTTTGGTTTATTAGAGACTAAAAAGTGACTA
TCTAACAAAATTTTTGTTAG

Product: HypQ3

Products: NA

Alternate protein names: Rubrerythrin-Like Protein YrkC

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSIYFDVKTIRELIGDNYREQREFTLEELAQYDGSNGKPAYVAIEGIVYDLSEKAVWANGTHFGLTAGKDLTEQFKSCHG
APKFLSTLPKVGILKANNRMNTVTMNRSEIQNKSNFTPDDWVRYITPLVNRALAEAKAGINPEHLYQEFILSGVLVGLGK
TPQEAIEQVEEWEKTGVSKLLAMSKMNRFY

Sequences:

>Translated_190_residues
MSIYFDVKTIRELIGDNYREQREFTLEELAQYDGSNGKPAYVAIEGIVYDLSEKAVWANGTHFGLTAGKDLTEQFKSCHG
APKFLSTLPKVGILKANNRMNTVTMNRSEIQNKSNFTPDDWVRYITPLVNRALAEAKAGINPEHLYQEFILSGVLVGLGK
TPQEAIEQVEEWEKTGVSKLLAMSKMNRFY
>Mature_189_residues
SIYFDVKTIRELIGDNYREQREFTLEELAQYDGSNGKPAYVAIEGIVYDLSEKAVWANGTHFGLTAGKDLTEQFKSCHGA
PKFLSTLPKVGILKANNRMNTVTMNRSEIQNKSNFTPDDWVRYITPLVNRALAEAKAGINPEHLYQEFILSGVLVGLGKT
PQEAIEQVEEWEKTGVSKLLAMSKMNRFY

Specific function: Unknown

COG id: COG4892

COG function: function code R; Predicted heme/steroid binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21457; Mature: 21325

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYFDVKTIRELIGDNYREQREFTLEELAQYDGSNGKPAYVAIEGIVYDLSEKAVWANG
CCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCCEECCC
THFGLTAGKDLTEQFKSCHGAPKFLSTLPKVGILKANNRMNTVTMNRSEIQNKSNFTPDD
CEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCEEEECCHHHHHCCCCCCHHH
WVRYITPLVNRALAEAKAGINPEHLYQEFILSGVLVGLGKTPQEAIEQVEEWEKTGVSKL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAMSKMNRFY
HHHHHHHHCC
>Mature Secondary Structure 
SIYFDVKTIRELIGDNYREQREFTLEELAQYDGSNGKPAYVAIEGIVYDLSEKAVWANG
CEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCCEECCC
THFGLTAGKDLTEQFKSCHGAPKFLSTLPKVGILKANNRMNTVTMNRSEIQNKSNFTPDD
CEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCEEEECCHHHHHCCCCCCHHH
WVRYITPLVNRALAEAKAGINPEHLYQEFILSGVLVGLGKTPQEAIEQVEEWEKTGVSKL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAMSKMNRFY
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA