| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187933646
Identifier: 187933646
GI number: 187933646
Start: 2073045
End: 2073554
Strand: Reverse
Name: 187933646
Synonym: CLL_A1993
Alternate gene names: NA
Gene position: 2073554-2073045 (Counterclockwise)
Preceding gene: 187932864
Following gene: 187934612
Centisome position: 54.56
GC content: 28.04
Gene sequence:
>510_bases ATGAGTTACACTACAAATAGACAACCACAAGGAATTTTGAAGAATATTGAAACTTTTTTTAGAGAGGGAATGATCGCTGA AATAGTTGCAATAAATGATTATAGTTATTTTATAAGCTTAACTGATAACAAAGAAGTAAAAGATATATTCCATCATATAA TGGAGGAAGAAAAAAGGCATTATGGATTGTTTTTGCAAGCATTAAGAAGTGTAGATAAAGAGCAAGCAGCAGCAAAGGCT GAAGTAGATGAACATTTAGAAATATCATCAAAGGAAAAATATAAAGAATATAATGGTAAAGGAAGTAAAAGCAATTTACT TACTCATATAAGAGATGCTATAAAAGGTGAGCTAGAGGCCATAGTATTATACGAATTTTTTATTGAAAATTTAGAGAATG AAAAAGCTATAGAACTTATAAAAGAAATAATTAAAGACGAAAAGGAACACGTGGAGGAATTAACAAAAGCGCTTACTATT TTAGATAAAGATAAGTATGATGATATTTAA
Upstream 100 bases:
>100_bases TAATATTGATTTAAAATACAAATTAATATTGTGATCAAGTGTAACAATAGGTATTTGATTTAATAAAATATTAGTAAGTA ATTAATTAAAGGGGATATTT
Downstream 100 bases:
>100_bases GAAAGTACTTAAGACATATTAGTTTATAATAATTTAATATTTTATTCATATATTAAAAATCTATTTATGATGATTAAAAA AATTAGAAAAACAAGAGGAC
Product: rubrerythrin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSYTTNRQPQGILKNIETFFREGMIAEIVAINDYSYFISLTDNKEVKDIFHHIMEEEKRHYGLFLQALRSVDKEQAAAKA EVDEHLEISSKEKYKEYNGKGSKSNLLTHIRDAIKGELEAIVLYEFFIENLENEKAIELIKEIIKDEKEHVEELTKALTI LDKDKYDDI
Sequences:
>Translated_169_residues MSYTTNRQPQGILKNIETFFREGMIAEIVAINDYSYFISLTDNKEVKDIFHHIMEEEKRHYGLFLQALRSVDKEQAAAKA EVDEHLEISSKEKYKEYNGKGSKSNLLTHIRDAIKGELEAIVLYEFFIENLENEKAIELIKEIIKDEKEHVEELTKALTI LDKDKYDDI >Mature_168_residues SYTTNRQPQGILKNIETFFREGMIAEIVAINDYSYFISLTDNKEVKDIFHHIMEEEKRHYGLFLQALRSVDKEQAAAKAE VDEHLEISSKEKYKEYNGKGSKSNLLTHIRDAIKGELEAIVLYEFFIENLENEKAIELIKEIIKDEKEHVEELTKALTIL DKDKYDDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19774; Mature: 19642
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTTNRQPQGILKNIETFFREGMIAEIVAINDYSYFISLTDNKEVKDIFHHIMEEEKRH CCCCCCCCHHHHHHHHHHHHHCCHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHHHH YGLFLQALRSVDKEQAAAKAEVDEHLEISSKEKYKEYNGKGSKSNLLTHIRDAIKGELEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IVLYEFFIENLENEKAIELIKEIIKDEKEHVEELTKALTILDKDKYDDI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SYTTNRQPQGILKNIETFFREGMIAEIVAINDYSYFISLTDNKEVKDIFHHIMEEEKRH CCCCCCCHHHHHHHHHHHHHCCHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHHHH YGLFLQALRSVDKEQAAAKAEVDEHLEISSKEKYKEYNGKGSKSNLLTHIRDAIKGELEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IVLYEFFIENLENEKAIELIKEIIKDEKEHVEELTKALTILDKDKYDDI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA