| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932864
Identifier: 187932864
GI number: 187932864
Start: 2073740
End: 2074327
Strand: Reverse
Name: 187932864
Synonym: CLL_A1994
Alternate gene names: NA
Gene position: 2074327-2073740 (Counterclockwise)
Preceding gene: 187935695
Following gene: 187933646
Centisome position: 54.58
GC content: 27.89
Gene sequence:
>588_bases ATGTTATTTAAAAATAATGAAGCGTCTTGGATTTTTGAACCCAAAACATATACTATATCAGATGAAAAGATTGTTATTAA AACTGAACCAAGAACAGATCTTTGGCAAAGAACTTATTATGGATTTCAAAACAATAATGCACCGGCATTGTTAGTTAGCA CAAAAGAAAAAGAATTTTCTTTTTTAGTGAAAACTCAATTTGACAGTAATCATCGTTTTGATCAATGTGGTGTTATAATT TATCAGGATAGTGATAATTGGTTTAAAGCATCTATTGAATATCAAAATGAAGAATACCAAAGACTTGGAAGCGTAGTAAC TAATTATGGTTATTCGGATTGGGCAACTACTGATATTTCTGCAAAATACAAACAAATGTATTATAGACTTAGTCGTCGTG AAAATGACTATTGTATTGAAAATTCATATGATGGAGTTAATTTTAAACAAATGAGAATTTTTCATTTATTTAAAGCAAGT GATGAAATACGTATGGGAATATATGCTTGTAGTCCAGAAGAATCTTCATTTAATGCTGTATTTACACAAATAAAATTTAC AGAATGTAAATGGCCAATTCATAAATAA
Upstream 100 bases:
>100_bases TCGTTACAAAGGATATTCCAGATAATGCAGTAGCTGTAGGAAATCCTTGTAGAGTTATAAGAATTGTAGATGAAGAATGA TACTAAATGGAGGGAAAACA
Downstream 100 bases:
>100_bases ATATTAAAAATTTTACTATAATGCTATAAAAATAAATATCCAATATTTAGATTACACTTATTAGACTATAGATATGATAA TTAATTAATATTGATTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLFKNNEASWIFEPKTYTISDEKIVIKTEPRTDLWQRTYYGFQNNNAPALLVSTKEKEFSFLVKTQFDSNHRFDQCGVII YQDSDNWFKASIEYQNEEYQRLGSVVTNYGYSDWATTDISAKYKQMYYRLSRRENDYCIENSYDGVNFKQMRIFHLFKAS DEIRMGIYACSPEESSFNAVFTQIKFTECKWPIHK
Sequences:
>Translated_195_residues MLFKNNEASWIFEPKTYTISDEKIVIKTEPRTDLWQRTYYGFQNNNAPALLVSTKEKEFSFLVKTQFDSNHRFDQCGVII YQDSDNWFKASIEYQNEEYQRLGSVVTNYGYSDWATTDISAKYKQMYYRLSRRENDYCIENSYDGVNFKQMRIFHLFKAS DEIRMGIYACSPEESSFNAVFTQIKFTECKWPIHK >Mature_195_residues MLFKNNEASWIFEPKTYTISDEKIVIKTEPRTDLWQRTYYGFQNNNAPALLVSTKEKEFSFLVKTQFDSNHRFDQCGVII YQDSDNWFKASIEYQNEEYQRLGSVVTNYGYSDWATTDISAKYKQMYYRLSRRENDYCIENSYDGVNFKQMRIFHLFKAS DEIRMGIYACSPEESSFNAVFTQIKFTECKWPIHK
Specific function: Unknown
COG id: COG3506
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322244, Length=182, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23295; Mature: 23295
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFKNNEASWIFEPKTYTISDEKIVIKTEPRTDLWQRTYYGFQNNNAPALLVSTKEKEFS CEEECCCCCEEECCCEEEECCCEEEEEECCCCHHHHHHHCCCCCCCCCEEEEEECCCCEE FLVKTQFDSNHRFDQCGVIIYQDSDNWFKASIEYQNEEYQRLGSVVTNYGYSDWATTDIS EEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCH AKYKQMYYRLSRRENDYCIENSYDGVNFKQMRIFHLFKASDEIRMGIYACSPEESSFNAV HHHHHHHHHHHCCCCCEEEECCCCCCCHHHEEEEEEECCCCCEEEEEEEECCCCCCCEEE FTQIKFTECKWPIHK EEEEEEEECCCCCCC >Mature Secondary Structure MLFKNNEASWIFEPKTYTISDEKIVIKTEPRTDLWQRTYYGFQNNNAPALLVSTKEKEFS CEEECCCCCEEECCCEEEECCCEEEEEECCCCHHHHHHHCCCCCCCCCEEEEEECCCCEE FLVKTQFDSNHRFDQCGVIIYQDSDNWFKASIEYQNEEYQRLGSVVTNYGYSDWATTDIS EEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCH AKYKQMYYRLSRRENDYCIENSYDGVNFKQMRIFHLFKASDEIRMGIYACSPEESSFNAV HHHHHHHHHHHCCCCCEEEECCCCCCCHHHEEEEEEECCCCCEEEEEEEECCCCCCCEEE FTQIKFTECKWPIHK EEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA