| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933636
Identifier: 187933636
GI number: 187933636
Start: 2014059
End: 2014946
Strand: Reverse
Name: 187933636
Synonym: CLL_A1928
Alternate gene names: NA
Gene position: 2014946-2014059 (Counterclockwise)
Preceding gene: 187934857
Following gene: 187932502
Centisome position: 53.02
GC content: 24.77
Gene sequence:
>888_bases ATGGGAAATAATATAGGAACTTGTGCATTATGTAAAAAAACAAATACTATTTTAGAAAAAAGTCACATAATACCAAAATT TATTTTTAGAAGAATTGTTAAGAAATCTGCTACTGGATTTATGCGTAATCCATTTAATCCAGATGAGAGAATTCAAGATG GAGATAAGCAGTACTTATTATGTGGTGAATGTGAGGATTTATTTAATGTTTCTGAAACCTTATTTGCAAACAAAATTTTT CATGGATACAAAGGTGGAAAATTAAAAGAGTTTCAATATGAAAAATGGCTAAATTTTTTTATTACTTCAGTTAATTGGCG TACACTTTATTTAGATATACAGGGGTTTAAAAATGATAATTCAATAACTAAAGAAAACTTAAAGGTTTTAATGGAAGATG AAGAAATTCTAAGAGATTATTTACTTGGAAAAAGAAATGATATATCTGATATGGAAAATCATATCGTCTTTTTTGATGAT GTTAAACTTGCAGATAAACAAACTTCTATGTCTGAACCTCATTCATTTTTTAGACATAGCTCTTTTGGATATACTTATAT AAGTCATGATTATAATGGATATTATGTTATAACCAATCTTTCAGGAATATTAATCTGTACAATCTTAAAAAAATCTAAAA TAGAAAGATGGGAAAATACTATAGTAAAAATAGATAAAGGAAACTTTAGAATTGAAAACCAAAAGGTAAAAAGTCCAGTG ATGGATGATATTTTTGAATATATGAAGGAAAGCCAAGAAGCTAAAAAAAATATATCAAAAGAAGAAATAGATAAAGTGAT TAATATTATTAAGAGAGATCCAGAAAAATTCATGAATACTGAAATATATAAAAATCATTTATTGGATGAAAAATTAAAAG AAAAATAA
Upstream 100 bases:
>100_bases TTAAAAATTGAATAATGCAGTATTGATAATATATGCTAAAATAGGAATTGTAAGTATATAAATTACGACATAATAATTAA GATTTAAAAGGGGAATGAAT
Downstream 100 bases:
>100_bases TATTATTAAAATACAAATATATATAAAGTGAACTTAATTTAAATACTAAAATAGTAAATAAAAAAGCAGTAACCTAAGTT ACCACTTGAACGCAAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGNNIGTCALCKKTNTILEKSHIIPKFIFRRIVKKSATGFMRNPFNPDERIQDGDKQYLLCGECEDLFNVSETLFANKIF HGYKGGKLKEFQYEKWLNFFITSVNWRTLYLDIQGFKNDNSITKENLKVLMEDEEILRDYLLGKRNDISDMENHIVFFDD VKLADKQTSMSEPHSFFRHSSFGYTYISHDYNGYYVITNLSGILICTILKKSKIERWENTIVKIDKGNFRIENQKVKSPV MDDIFEYMKESQEAKKNISKEEIDKVINIIKRDPEKFMNTEIYKNHLLDEKLKEK
Sequences:
>Translated_295_residues MGNNIGTCALCKKTNTILEKSHIIPKFIFRRIVKKSATGFMRNPFNPDERIQDGDKQYLLCGECEDLFNVSETLFANKIF HGYKGGKLKEFQYEKWLNFFITSVNWRTLYLDIQGFKNDNSITKENLKVLMEDEEILRDYLLGKRNDISDMENHIVFFDD VKLADKQTSMSEPHSFFRHSSFGYTYISHDYNGYYVITNLSGILICTILKKSKIERWENTIVKIDKGNFRIENQKVKSPV MDDIFEYMKESQEAKKNISKEEIDKVINIIKRDPEKFMNTEIYKNHLLDEKLKEK >Mature_294_residues GNNIGTCALCKKTNTILEKSHIIPKFIFRRIVKKSATGFMRNPFNPDERIQDGDKQYLLCGECEDLFNVSETLFANKIFH GYKGGKLKEFQYEKWLNFFITSVNWRTLYLDIQGFKNDNSITKENLKVLMEDEEILRDYLLGKRNDISDMENHIVFFDDV KLADKQTSMSEPHSFFRHSSFGYTYISHDYNGYYVITNLSGILICTILKKSKIERWENTIVKIDKGNFRIENQKVKSPVM DDIFEYMKESQEAKKNISKEEIDKVINIIKRDPEKFMNTEIYKNHLLDEKLKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34847; Mature: 34716
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNNIGTCALCKKTNTILEKSHIIPKFIFRRIVKKSATGFMRNPFNPDERIQDGDKQYLL CCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEE CGECEDLFNVSETLFANKIFHGYKGGKLKEFQYEKWLNFFITSVNWRTLYLDIQGFKNDN ECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCC SITKENLKVLMEDEEILRDYLLGKRNDISDMENHIVFFDDVKLADKQTSMSEPHSFFRHS CCCHHHHHEEECHHHHHHHHHCCCCCCHHHHHCCEEEEECCEECCCCCCCCCHHHHHHCC SFGYTYISHDYNGYYVITNLSGILICTILKKSKIERWENTIVKIDKGNFRIENQKVKSPV CCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCHHHCCHH MDDIFEYMKESQEAKKNISKEEIDKVINIIKRDPEKFMNTEIYKNHLLDEKLKEK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNNIGTCALCKKTNTILEKSHIIPKFIFRRIVKKSATGFMRNPFNPDERIQDGDKQYLL CCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEE CGECEDLFNVSETLFANKIFHGYKGGKLKEFQYEKWLNFFITSVNWRTLYLDIQGFKNDN ECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCC SITKENLKVLMEDEEILRDYLLGKRNDISDMENHIVFFDDVKLADKQTSMSEPHSFFRHS CCCHHHHHEEECHHHHHHHHHCCCCCCHHHHHCCEEEEECCEECCCCCCCCCHHHHHHCC SFGYTYISHDYNGYYVITNLSGILICTILKKSKIERWENTIVKIDKGNFRIENQKVKSPV CCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCHHHCCHH MDDIFEYMKESQEAKKNISKEEIDKVINIIKRDPEKFMNTEIYKNHLLDEKLKEK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA