Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187932502

Identifier: 187932502

GI number: 187932502

Start: 2012899

End: 2013588

Strand: Reverse

Name: 187932502

Synonym: CLL_A1927

Alternate gene names: NA

Gene position: 2013588-2012899 (Counterclockwise)

Preceding gene: 187933636

Following gene: 187935774

Centisome position: 52.98

GC content: 25.07

Gene sequence:

>690_bases
ATGGAAAACAAATTATTAAATCTTACAAGTGATAAGGAATTAAGAATAACAAGCGTAGAATTAGTTGATATTATAAATGA
TTTTAGAAGATTAGAGAGCAAAAGTACTGGAAAAGAGTATGTTTCAATTCAACATAATACTTTTATGAGAAAAATAAGAA
ATGAAATAGAAACATTAGATTTACTAGGTTTGGAAGGACAGAAAAATTTTGTACAGTCCTCATACGTTAATTCTCAAAAC
AAAGTACAACCTTGCTATTCATTAAATAAATATGGAATGTTACAAATGCTAAATAGTGAATCTGTATTAGTTAGATATAA
AACTATTGAATATATAAATGAACTTGAAGATGAAAATATGAAATTAAAAGAAGGACAACTATTAATTTCAGCTAAAGAAG
AAATAAAGGAACTTAAAAGTACATTAGATGATTTTAAAAAAGCAACAGAAGAAGCAAAACAAATGTACAAACCTAGTCAT
AAGAAAAAACTTGATTATAACAAAATGATAAAATCATTAACTAATAATAAAGAAGAAGCACAAGTAGTTAAGGATTGGGT
ATTTGGTTTATTAAATATAAGCAAGTGGGAAGATACTTGTGCGAATGATACTAAAAGAATAATTGAAGCTATAAATACAG
TAGCTAGATTATTAACTATAAAGAAATTTGAACAGTTAAGTATGCTTTAG

Upstream 100 bases:

>100_bases
AGTAGTACATCAACTCTACTGGTTTTTATAGATAGGATTTGGAATTAAAGAAGTTCCCACCTATCTTTTTTATTTTATTT
AAGAAAGGTAGGATGTAAAA

Downstream 100 bases:

>100_bases
AATTCTAGAAATAGGGTTCTTTTTTAATGCAATAAAACAGAAAGTAGGTGAGAAATATGATTACAGTAATGGCATGGATA
GTTTTAATAATTAATGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLDLLGLEGQKNFVQSSYVNSQN
KVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENMKLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSH
KKKLDYNKMIKSLTNNKEEAQVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML

Sequences:

>Translated_229_residues
MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLDLLGLEGQKNFVQSSYVNSQN
KVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENMKLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSH
KKKLDYNKMIKSLTNNKEEAQVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML
>Mature_229_residues
MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLDLLGLEGQKNFVQSSYVNSQN
KVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENMKLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSH
KKKLDYNKMIKSLTNNKEEAQVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26773; Mature: 26773

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLD
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHH
LLGLEGQKNFVQSSYVNSQNKVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENM
HHCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCC
KLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSHKKKLDYNKMIKSLTNNKEEA
EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCHHHH
QVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENKLLNLTSDKELRITSVELVDIINDFRRLESKSTGKEYVSIQHNTFMRKIRNEIETLD
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHH
LLGLEGQKNFVQSSYVNSQNKVQPCYSLNKYGMLQMLNSESVLVRYKTIEYINELEDENM
HHCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCC
KLKEGQLLISAKEEIKELKSTLDDFKKATEEAKQMYKPSHKKKLDYNKMIKSLTNNKEEA
EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCHHHH
QVVKDWVFGLLNISKWEDTCANDTKRIIEAINTVARLLTIKKFEQLSML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA