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The map label for this gene is yxkH [H]

Identifier: 187933622

GI number: 187933622

Start: 360062

End: 360982

Strand: Reverse

Name: yxkH [H]

Synonym: CLL_A0355

Alternate gene names: 187933622

Gene position: 360982-360062 (Counterclockwise)

Preceding gene: 187933033

Following gene: 187934964

Centisome position: 9.5

GC content: 25.73

Gene sequence:

>921_bases
TTGAAAAATTTAAATAATTTTTTTACAAAAAAAAATATCACTATATTAACTTGTGTTTTAATTTGTGTAATTATTTCATA
TTTTATGTATAATAACTTATTCTTAAAAGATACTGTTAATAAAAATCCAAATAATTCTACTACTACTGAGACTATTGATA
ATAATCAAGAAATTAATGATACGGATAAAGAAATCTCTGATGTTGAAAATGAAAAAGAAGTTAACACAAATAATGATTTA
AAATTAACTAATGAAAATGTTGGAGTTCCTGTTTTATATTATCATTCAGTTAAAAATTCTGAAAATAATGAGGTTATTAT
AGCTCCTCAAAAACTTAGAAATCAACTGAGATATATAAAGGATTCTGGATATACTACTTTAACTCTCAAAGAGTTAGAAG
ATTATCTATTAAACAATACCCCTATCCCAGAAAAAAGTATTGTAATCACTTTTGATGATGGATATATGGATAACTATACT
AATGCATTTCCTATATTAAAAGATTTAGATATGAAAGCTACTATATTTTGTATTACTTTTGAATTAGACGGAAAATACTA
CCTTTCAGAGTCAGCTATAAAGAAGATGTCTGATTACGGAATAGATATTCAAAGCCATACCGCTGGTCATCCAGATCTTA
CTAAAATGACATATGATGAACAACTAAAAGAATTTTTAGAATCTAAAGAAATATTAGAAGCAATTACTGAGAAGCCAGTT
ACTAGTATCGCTTATCCTTATGGAAATTATAATGATAACAGTGTAAAGGCTGCTAAAGATGCTGGTTTTAAATTAGGTTT
TACTACAGATTTGGGACTTTCTGATAGAGATGATAATCCCCTATTACTTAACAGAATTTATATAAGTTCTAATTATGACA
TGGATACATTCAAACAGCTATTAGAAAACACAAAAAAATAA

Upstream 100 bases:

>100_bases
CTTTTTTGTTTTTTTGTTATAAAAAAAATATTATGTTAAAATGTGCTTATTGTGTTTATATTATAAATAAAGACTTAAAA
TAACTAGGAGGATACTATCA

Downstream 100 bases:

>100_bases
AAGACTATATTTTTTTAATATGTATTAATATATAACAGCAAAATGGCATTGTAATTATACTATACCCATTTTTAAATTAC
TCAGTCCATTTTGCTATTTA

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKNLNNFFTKKNITILTCVLICVIISYFMYNNLFLKDTVNKNPNNSTTTETIDNNQEINDTDKEISDVENEKEVNTNNDL
KLTNENVGVPVLYYHSVKNSENNEVIIAPQKLRNQLRYIKDSGYTTLTLKELEDYLLNNTPIPEKSIVITFDDGYMDNYT
NAFPILKDLDMKATIFCITFELDGKYYLSESAIKKMSDYGIDIQSHTAGHPDLTKMTYDEQLKEFLESKEILEAITEKPV
TSIAYPYGNYNDNSVKAAKDAGFKLGFTTDLGLSDRDDNPLLLNRIYISSNYDMDTFKQLLENTKK

Sequences:

>Translated_306_residues
MKNLNNFFTKKNITILTCVLICVIISYFMYNNLFLKDTVNKNPNNSTTTETIDNNQEINDTDKEISDVENEKEVNTNNDL
KLTNENVGVPVLYYHSVKNSENNEVIIAPQKLRNQLRYIKDSGYTTLTLKELEDYLLNNTPIPEKSIVITFDDGYMDNYT
NAFPILKDLDMKATIFCITFELDGKYYLSESAIKKMSDYGIDIQSHTAGHPDLTKMTYDEQLKEFLESKEILEAITEKPV
TSIAYPYGNYNDNSVKAAKDAGFKLGFTTDLGLSDRDDNPLLLNRIYISSNYDMDTFKQLLENTKK
>Mature_306_residues
MKNLNNFFTKKNITILTCVLICVIISYFMYNNLFLKDTVNKNPNNSTTTETIDNNQEINDTDKEISDVENEKEVNTNNDL
KLTNENVGVPVLYYHSVKNSENNEVIIAPQKLRNQLRYIKDSGYTTLTLKELEDYLLNNTPIPEKSIVITFDDGYMDNYT
NAFPILKDLDMKATIFCITFELDGKYYLSESAIKKMSDYGIDIQSHTAGHPDLTKMTYDEQLKEFLESKEILEAITEKPV
TSIAYPYGNYNDNSVKAAKDAGFKLGFTTDLGLSDRDDNPLLLNRIYISSNYDMDTFKQLLENTKK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=239, Percent_Identity=34.3096234309623, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 35116; Mature: 35116

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLNNFFTKKNITILTCVLICVIISYFMYNNLFLKDTVNKNPNNSTTTETIDNNQEIND
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEECCCCCCCCC
TDKEISDVENEKEVNTNNDLKLTNENVGVPVLYYHSVKNSENNEVIIAPQKLRNQLRYIK
CHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHH
DSGYTTLTLKELEDYLLNNTPIPEKSIVITFDDGYMDNYTNAFPILKDLDMKATIFCITF
CCCCEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEE
ELDGKYYLSESAIKKMSDYGIDIQSHTAGHPDLTKMTYDEQLKEFLESKEILEAITEKPV
EECCCEEECHHHHHHHHHCCCEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCC
TSIAYPYGNYNDNSVKAAKDAGFKLGFTTDLGLSDRDDNPLLLNRIYISSNYDMDTFKQL
CEEECCCCCCCCCCEEHHHCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHH
LENTKK
HHHCCC
>Mature Secondary Structure
MKNLNNFFTKKNITILTCVLICVIISYFMYNNLFLKDTVNKNPNNSTTTETIDNNQEIND
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEECCCCCCCCC
TDKEISDVENEKEVNTNNDLKLTNENVGVPVLYYHSVKNSENNEVIIAPQKLRNQLRYIK
CHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHH
DSGYTTLTLKELEDYLLNNTPIPEKSIVITFDDGYMDNYTNAFPILKDLDMKATIFCITF
CCCCEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEE
ELDGKYYLSESAIKKMSDYGIDIQSHTAGHPDLTKMTYDEQLKEFLESKEILEAITEKPV
EECCCEEECHHHHHHHHHCCCEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCC
TSIAYPYGNYNDNSVKAAKDAGFKLGFTTDLGLSDRDDNPLLLNRIYISSNYDMDTFKQL
CEEECCCCCCCCCCEEHHHCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHH
LENTKK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]