| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is glgP [H]
Identifier: 187933573
GI number: 187933573
Start: 3598808
End: 3601249
Strand: Reverse
Name: glgP [H]
Synonym: CLL_A3415
Alternate gene names: 187933573
Gene position: 3601249-3598808 (Counterclockwise)
Preceding gene: 187935715
Following gene: 187932508
Centisome position: 94.76
GC content: 28.46
Gene sequence:
>2442_bases ATGATAGAAATGGATAAAAAAACATTCAAAAAAGCATATGTAAATAAATTTTTAGAAATGCACGGAATAGAATTGAAGGA AGGAACAAACCAACAAAAATACGAAGCTTTAGGAAGTTTGGTAAGAGATTATGTAACGAGGACATGGCTTAAAACAAATA AAAAATATAATAGAACAGGTGAAAAACAAGTTTATTATTTTTCAATGGAATTTTTACTTGGAAGATTATTAGGCAATTCT CTATTAAATATTGGAATAAGAGATATTTGTAAAGAGGCTTTAGAAGAGCTTAATATAAATTTAAAAGACTTAGAAAATTT AGAAGAAGATCAAGGTCTTGGTAATGGAGGGTTAGGTAGACTTGCTGCATGTTTTTTAGATTCAATGGCATCATTAAATA TACCTGGTCATGGATGTGGAATTAGATATAAATATGGTTTTTTTGAACAAAAAATTATTGATGGAAAACAAGTTGAAGTG TCTGATAACTGGTTGAAGGAAGGTAATGTATGGGAAAAAAGGAAAACTAATAAATCTGAAATTGTTAAATTTGGTGGAGA AATTAAAGTAGAAGAGAAAAATGGTAGATTAAATTTTGTTCATGCAGATTATGAACCTATATTAGCAATACCATACGATA CTCCAGTTGTTGGCTTCAAAAATGAAATAGTAAATACCTTAAGACTTTGGAGTGCAGAACCATTATCTAATGAATTTGAT TTTTCTTCGTTTAATAGAGGTGATTTTTTACAAGCTCTTCAATATAAAAATTCAGTTGAGGCCATATCACAGGTTCTTTA TCCTGAAGATTCATTTTATGAAGGAAAAATGCTTAGATTAAAGCAACAATACTTTTTTGTGTCAGCAGGAATACAAAGTA TAATAAGGCATTTTAAAAAACATGGTGGAAAGATACCAGATTTTGCAGAGAAAATAGCTATTCATATAAATGATACTCAC CCAACTCTTGCTATACCAGAGCTTATGAGAATATTGCTTGATGAAGAGGAATTAAATTGGGATGATGCATGGAGAATAAC TGAAAATACTATATCGTATACAAATCATACTATTTTATCAGAGGCTTTAGAGAAGTGGCCTATTGATATGTTCAAGAAAT TACTTCCTAGAATATTCATGATAGTTGAAGAAATAAATAGAAGATATTGTGAAGAGCTAAAAGTTAAATTCCAAGGTCAA GAAGCTAAGATATCAAATATGGCCATAATTGGAGAAGGACAAATAAGAATGGCTAACCTTGCTATAGTAGGCAGCCATAG TGTTAATGGGGTAGCAAAACTTCATACTGATATATTAAAGAAAAAAGAAATGAAAGATTTTTACTACTTGTATCCAAAAA AATTTAATAATAAAACAAATGGTATAACTCATAGAAGATGGTTATTAAAGTGTAATCCTGATTTAACAAGATTACTTTCA GATACAATAGGAGACGGATTTATAAAGCACCCACTAGACTTAGAAAATTTTCAAAAACATTTAGATGATAAGAATGTTTT AGATGAGTTAGGCAAGATAAAGCTTGAAAATAAGAAAAAACTTGCAAAAACAATATTGGATAATGAGGGCATTGTAGTTG ATCCTAACTCTATATTTGATGTTCAAGTAAAGCGAATACATGCATATAAGAGACAAACCTTAAATTGTTTAAGAATAATG GATTTATATAATAAGTTAATTGATAATCCTAATTTAGATGTTTATCCAAGAACATTTATATTTGGTGGAAAAGCTGCACC AGGATATTATTTAGCAAAAAATATTATTGAGCTTATAAATAATATTGCAAATAAAGTAAATAATGATCCAAGAGTTAATA AGAAAATGAAAGTAGTATTTATGGAAAACTATGATGTATCTTTAGCTGAAGAGATTGTTCCAGGAGCTGATGTAAGTGAA CAAATTTCAACAACAACTAAGGAAGCCTCAGGAACTTCAAACATGAAATTTATGATGAATGGAGCTATTACAGTAGCAAC ACTTGATGGAGCCAATATAGAAATTAAAGATGAAGTTGGAGAAGACAATATCGTTATTTTTGGATTAGAGGCAGATGAAG TCTTAAGTTACTATAAAAATGGAGGGTATAGTTCATTAGAAATGTATAATAATGACTCAAGAATTAAGAATGTTATTAAT GATTTAACTAATGGAAAATATCATAATGACAAGCAAAGATTCAAAACTGTATATCAAAATTTAATAAATTATAATGATGA ATTCTTTGTATTAAAAGATTTTGATTCTTATTTAAAAGCACAGGATAAAATAGATACGCTTTATAGGGATAAAAATATTT GGAATAAGATATGTGGAATAAATATATCACACTCAGGAATATTTTCATCTGATAGAACTATTGAACAATATGCAACTGGA ATCTGGGGATCTGAAGTTATTTACAAGAACTTAGGAATATAA
Upstream 100 bases:
>100_bases TTCTAATAATAGTTGGAGCAAATCAGCAGATGAATATTTAAATATGTACAAAGAATTAAGCTATAGATAATCTAATAATT TTTCTAAAGGAGGGGTAATG
Downstream 100 bases:
>100_bases AAATAAATAACAAGTTAAAGATACGACAGATATTTTATGAAATACAATGACTTGGGTTCTGCGAATAGTTGTGATATTAG TAGGTTCCAATGAAGAAATA
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 813; Mature: 813
Protein sequence:
>813_residues MIEMDKKTFKKAYVNKFLEMHGIELKEGTNQQKYEALGSLVRDYVTRTWLKTNKKYNRTGEKQVYYFSMEFLLGRLLGNS LLNIGIRDICKEALEELNINLKDLENLEEDQGLGNGGLGRLAACFLDSMASLNIPGHGCGIRYKYGFFEQKIIDGKQVEV SDNWLKEGNVWEKRKTNKSEIVKFGGEIKVEEKNGRLNFVHADYEPILAIPYDTPVVGFKNEIVNTLRLWSAEPLSNEFD FSSFNRGDFLQALQYKNSVEAISQVLYPEDSFYEGKMLRLKQQYFFVSAGIQSIIRHFKKHGGKIPDFAEKIAIHINDTH PTLAIPELMRILLDEEELNWDDAWRITENTISYTNHTILSEALEKWPIDMFKKLLPRIFMIVEEINRRYCEELKVKFQGQ EAKISNMAIIGEGQIRMANLAIVGSHSVNGVAKLHTDILKKKEMKDFYYLYPKKFNNKTNGITHRRWLLKCNPDLTRLLS DTIGDGFIKHPLDLENFQKHLDDKNVLDELGKIKLENKKKLAKTILDNEGIVVDPNSIFDVQVKRIHAYKRQTLNCLRIM DLYNKLIDNPNLDVYPRTFIFGGKAAPGYYLAKNIIELINNIANKVNNDPRVNKKMKVVFMENYDVSLAEEIVPGADVSE QISTTTKEASGTSNMKFMMNGAITVATLDGANIEIKDEVGEDNIVIFGLEADEVLSYYKNGGYSSLEMYNNDSRIKNVIN DLTNGKYHNDKQRFKTVYQNLINYNDEFFVLKDFDSYLKAQDKIDTLYRDKNIWNKICGINISHSGIFSSDRTIEQYATG IWGSEVIYKNLGI
Sequences:
>Translated_813_residues MIEMDKKTFKKAYVNKFLEMHGIELKEGTNQQKYEALGSLVRDYVTRTWLKTNKKYNRTGEKQVYYFSMEFLLGRLLGNS LLNIGIRDICKEALEELNINLKDLENLEEDQGLGNGGLGRLAACFLDSMASLNIPGHGCGIRYKYGFFEQKIIDGKQVEV SDNWLKEGNVWEKRKTNKSEIVKFGGEIKVEEKNGRLNFVHADYEPILAIPYDTPVVGFKNEIVNTLRLWSAEPLSNEFD FSSFNRGDFLQALQYKNSVEAISQVLYPEDSFYEGKMLRLKQQYFFVSAGIQSIIRHFKKHGGKIPDFAEKIAIHINDTH PTLAIPELMRILLDEEELNWDDAWRITENTISYTNHTILSEALEKWPIDMFKKLLPRIFMIVEEINRRYCEELKVKFQGQ EAKISNMAIIGEGQIRMANLAIVGSHSVNGVAKLHTDILKKKEMKDFYYLYPKKFNNKTNGITHRRWLLKCNPDLTRLLS DTIGDGFIKHPLDLENFQKHLDDKNVLDELGKIKLENKKKLAKTILDNEGIVVDPNSIFDVQVKRIHAYKRQTLNCLRIM DLYNKLIDNPNLDVYPRTFIFGGKAAPGYYLAKNIIELINNIANKVNNDPRVNKKMKVVFMENYDVSLAEEIVPGADVSE QISTTTKEASGTSNMKFMMNGAITVATLDGANIEIKDEVGEDNIVIFGLEADEVLSYYKNGGYSSLEMYNNDSRIKNVIN DLTNGKYHNDKQRFKTVYQNLINYNDEFFVLKDFDSYLKAQDKIDTLYRDKNIWNKICGINISHSGIFSSDRTIEQYATG IWGSEVIYKNLGI >Mature_813_residues MIEMDKKTFKKAYVNKFLEMHGIELKEGTNQQKYEALGSLVRDYVTRTWLKTNKKYNRTGEKQVYYFSMEFLLGRLLGNS LLNIGIRDICKEALEELNINLKDLENLEEDQGLGNGGLGRLAACFLDSMASLNIPGHGCGIRYKYGFFEQKIIDGKQVEV SDNWLKEGNVWEKRKTNKSEIVKFGGEIKVEEKNGRLNFVHADYEPILAIPYDTPVVGFKNEIVNTLRLWSAEPLSNEFD FSSFNRGDFLQALQYKNSVEAISQVLYPEDSFYEGKMLRLKQQYFFVSAGIQSIIRHFKKHGGKIPDFAEKIAIHINDTH PTLAIPELMRILLDEEELNWDDAWRITENTISYTNHTILSEALEKWPIDMFKKLLPRIFMIVEEINRRYCEELKVKFQGQ EAKISNMAIIGEGQIRMANLAIVGSHSVNGVAKLHTDILKKKEMKDFYYLYPKKFNNKTNGITHRRWLLKCNPDLTRLLS DTIGDGFIKHPLDLENFQKHLDDKNVLDELGKIKLENKKKLAKTILDNEGIVVDPNSIFDVQVKRIHAYKRQTLNCLRIM DLYNKLIDNPNLDVYPRTFIFGGKAAPGYYLAKNIIELINNIANKVNNDPRVNKKMKVVFMENYDVSLAEEIVPGADVSE QISTTTKEASGTSNMKFMMNGAITVATLDGANIEIKDEVGEDNIVIFGLEADEVLSYYKNGGYSSLEMYNNDSRIKNVIN DLTNGKYHNDKQRFKTVYQNLINYNDEFFVLKDFDSYLKAQDKIDTLYRDKNIWNKICGINISHSGIFSSDRTIEQYATG IWGSEVIYKNLGI
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=791, Percent_Identity=49.4310998735778, Blast_Score=735, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=791, Percent_Identity=47.1554993678888, Blast_Score=729, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=790, Percent_Identity=46.9620253164557, Blast_Score=717, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=697, Percent_Identity=50.0717360114778, Blast_Score=684, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=684, Percent_Identity=46.7836257309941, Blast_Score=637, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=767, Percent_Identity=46.8057366362451, Blast_Score=691, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=750, Percent_Identity=44.6666666666667, Blast_Score=666, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=810, Percent_Identity=47.037037037037, Blast_Score=744, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=810, Percent_Identity=47.037037037037, Blast_Score=744, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=815, Percent_Identity=43.680981595092, Blast_Score=620, Evalue=1e-178, Organism=Drosophila melanogaster, GI78706832, Length=791, Percent_Identity=48.2932996207333, Blast_Score=733, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=791, Percent_Identity=48.2932996207333, Blast_Score=733, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93567; Mature: 93567
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEMDKKTFKKAYVNKFLEMHGIELKEGTNQQKYEALGSLVRDYVTRTWLKTNKKYNRTG CCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EKQVYYFSMEFLLGRLLGNSLLNIGIRDICKEALEELNINLKDLENLEEDQGLGNGGLGR CCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCHHHCCCCCCCHHH LAACFLDSMASLNIPGHGCGIRYKYGFFEQKIIDGKQVEVSDNWLKEGNVWEKRKTNKSE HHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCEEEECCCHHCCCCCCHHHCCCHHH IVKFGGEIKVEEKNGRLNFVHADYEPILAIPYDTPVVGFKNEIVNTLRLWSAEPLSNEFD HHCCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC FSSFNRGDFLQALQYKNSVEAISQVLYPEDSFYEGKMLRLKQQYFFVSAGIQSIIRHFKK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HGGKIPDFAEKIAIHINDTHPTLAIPELMRILLDEEELNWDDAWRITENTISYTNHTILS CCCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHH EALEKWPIDMFKKLLPRIFMIVEEINRRYCEELKVKFQGQEAKISNMAIIGEGQIRMANL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCEEEEECCCEEEEEE AIVGSHSVNGVAKLHTDILKKKEMKDFYYLYPKKFNNKTNGITHRRWLLKCNPDLTRLLS EEEECCCCCHHHHHHHHHHHHHHCCHHEEECCHHCCCCCCCEEEEEEEEECCCHHHHHHH DTIGDGFIKHPLDLENFQKHLDDKNVLDELGKIKLENKKKLAKTILDNEGIVVDPNSIFD HHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHCEEECHHHHHHHHHHCCCCEEECCCCEEH VQVKRIHAYKRQTLNCLRIMDLYNKLIDNPNLDVYPRTFIFGGKAAPGYYLAKNIIELIN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH NIANKVNNDPRVNKKMKVVFMENYDVSLAEEIVPGADVSEQISTTTKEASGTSNMKFMMN HHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEE GAITVATLDGANIEIKDEVGEDNIVIFGLEADEVLSYYKNGGYSSLEMYNNDSRIKNVIN CEEEEEEECCCCEEEECCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEECCHHHHHHHHH DLTNGKYHNDKQRFKTVYQNLINYNDEFFVLKDFDSYLKAQDKIDTLYRDKNIWNKICGI HHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC NISHSGIFSSDRTIEQYATGIWGSEVIYKNLGI CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure MIEMDKKTFKKAYVNKFLEMHGIELKEGTNQQKYEALGSLVRDYVTRTWLKTNKKYNRTG CCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EKQVYYFSMEFLLGRLLGNSLLNIGIRDICKEALEELNINLKDLENLEEDQGLGNGGLGR CCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCHHHCCCCCCCHHH LAACFLDSMASLNIPGHGCGIRYKYGFFEQKIIDGKQVEVSDNWLKEGNVWEKRKTNKSE HHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCEEEECCCHHCCCCCCHHHCCCHHH IVKFGGEIKVEEKNGRLNFVHADYEPILAIPYDTPVVGFKNEIVNTLRLWSAEPLSNEFD HHCCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC FSSFNRGDFLQALQYKNSVEAISQVLYPEDSFYEGKMLRLKQQYFFVSAGIQSIIRHFKK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HGGKIPDFAEKIAIHINDTHPTLAIPELMRILLDEEELNWDDAWRITENTISYTNHTILS CCCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHH EALEKWPIDMFKKLLPRIFMIVEEINRRYCEELKVKFQGQEAKISNMAIIGEGQIRMANL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCEEEEECCCEEEEEE AIVGSHSVNGVAKLHTDILKKKEMKDFYYLYPKKFNNKTNGITHRRWLLKCNPDLTRLLS EEEECCCCCHHHHHHHHHHHHHHCCHHEEECCHHCCCCCCCEEEEEEEEECCCHHHHHHH DTIGDGFIKHPLDLENFQKHLDDKNVLDELGKIKLENKKKLAKTILDNEGIVVDPNSIFD HHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHCEEECHHHHHHHHHHCCCCEEECCCCEEH VQVKRIHAYKRQTLNCLRIMDLYNKLIDNPNLDVYPRTFIFGGKAAPGYYLAKNIIELIN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH NIANKVNNDPRVNKKMKVVFMENYDVSLAEEIVPGADVSEQISTTTKEASGTSNMKFMMN HHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEE GAITVATLDGANIEIKDEVGEDNIVIFGLEADEVLSYYKNGGYSSLEMYNNDSRIKNVIN CEEEEEEECCCCEEEECCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEECCHHHHHHHHH DLTNGKYHNDKQRFKTVYQNLINYNDEFFVLKDFDSYLKAQDKIDTLYRDKNIWNKICGI HHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC NISHSGIFSSDRTIEQYATGIWGSEVIYKNLGI CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8145641; 9387221; 9384377 [H]