| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933493
Identifier: 187933493
GI number: 187933493
Start: 2923503
End: 2923754
Strand: Reverse
Name: 187933493
Synonym: CLL_A2850
Alternate gene names: NA
Gene position: 2923754-2923503 (Counterclockwise)
Preceding gene: 187932513
Following gene: 187935376
Centisome position: 76.93
GC content: 25.79
Gene sequence:
>252_bases ATGGAAGAAAAAGAGATAATGTCTTTTAAAGATGAAGCTGGAAATAAGGTTGATTTTGAGGCAATAGCTAGAATTTATTT GGATAAAACAGAATATTTATTATTATCACCAGTCGATGAATCATCAGATGATGCCAACATTTTTGCATTTAGAGTAGACA GAAATAAGGACGATAAAGAAGAATTAAATATTGTTGAAGATGAAAAAGAATTTGAAGCAATAAAAAAAGAATATAAAAAA TTATTATATTAG
Upstream 100 bases:
>100_bases AAAAAAATATATTCATTAAAAATAAAAAGTGCATATAATAATATCAACTATTGGAAGTTGAATTATTATATGTTCTATAA AAAATTAAGAGGTGAACAAA
Downstream 100 bases:
>100_bases GAGAGGATAGTAAATGAAAAGTTCCGAGATAATAGAGTATTTAGAGAAAAACGGATTATCTGAAGTTGAAGAAATAGATA TAACTGAGGAATATACACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MEEKEIMSFKDEAGNKVDFEAIARIYLDKTEYLLLSPVDESSDDANIFAFRVDRNKDDKEELNIVEDEKEFEAIKKEYKK LLY
Sequences:
>Translated_83_residues MEEKEIMSFKDEAGNKVDFEAIARIYLDKTEYLLLSPVDESSDDANIFAFRVDRNKDDKEELNIVEDEKEFEAIKKEYKK LLY >Mature_83_residues MEEKEIMSFKDEAGNKVDFEAIARIYLDKTEYLLLSPVDESSDDANIFAFRVDRNKDDKEELNIVEDEKEFEAIKKEYKK LLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0473 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009711 [H]
Pfam domain/function: PF06949 DUF1292 [H]
EC number: NA
Molecular weight: Translated: 9860; Mature: 9860
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKEIMSFKDEAGNKVDFEAIARIYLDKTEYLLLSPVDESSDDANIFAFRVDRNKDDKE CCCCHHHCCCCCCCCEECHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCHH ELNIVEDEKEFEAIKKEYKKLLY HCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEEKEIMSFKDEAGNKVDFEAIARIYLDKTEYLLLSPVDESSDDANIFAFRVDRNKDDKE CCCCHHHCCCCCCCCEECHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCHH ELNIVEDEKEFEAIKKEYKKLLY HCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA