| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is pit [H]
Identifier: 187932989
GI number: 187932989
Start: 3745959
End: 3746957
Strand: Reverse
Name: pit [H]
Synonym: CLL_A3538
Alternate gene names: 187932989
Gene position: 3746957-3745959 (Counterclockwise)
Preceding gene: 187935722
Following gene: 187932438
Centisome position: 98.6
GC content: 31.13
Gene sequence:
>999_bases ATGCATAGTTCGTTAATTGTAACAATACTAATAATAATTTTTGCGGTAACATTTGACTTTATAAATGGATTTCATGATAC AGCTACAGCGGTTGCAACTTCAATAACTACAAGGGCACTTACTCCTAAACAAGCTATAATAATATGTTGTATATTTAATT TTTTAGGTGCCTTTATGGGGACAGCAGTTGCAAAAACAGTTGGTGAAAATATTGTAAGTCATACATCTATACCACAATGG GTAATAATGTGTGTATTAATTTCATCTATAATTTGGAATTTGCTAACATGGTATTTTGGAATTCCAAGTAGTTCATCTCA TGCTTTAATAGGAGCACTTGTAGGAGCAGGAATTGCATATACTAGTACTCTTAATGTTGTTAATTGGTACAATCTTTTTC ATAGCGTAATTTTATGGTTATTTCTTTCACCTGTAATAGGCTTTATAGTTGGATATATATTGATGGTAATATTAAATTTT GCATTAAAGTCTCATAAGAGAACTGTTGTAAATAAGATATTTTTAAAATTACAAGTATTAGCTGGAGCATTTATGGCATT TAACCATGGTGGAAATGATGCACAAAAATCTATGGGAATAATAACGATGGCATTACTAAGTGGTGGGTTAATAAGCACAT TTGAAGTGCCTGCATGGGTAATTTTTATTTGTGCATTATCAATGGCACTTGGAACTTCTATAGGTGGTAAAAAGATAATA AAAACTATGGGAAGTGGAATGGCAAAATTAACTCCGGTAAATGGATTTGCAGCTCAAACTGGTGCTGCTTGTGTAATATT AACAGCAACATTATTTCATGCACCAGTAAGTACAACACATATAATAACAACAACCATAATGGGGGTTGGAGCATCTAAAA GGTTTAAAAATGTAAAATGGGGAGTAGCTAAACAAATAGTTTGGGCATGGGTTTTAACTATTCCAATAACAGCAATATTT TCAGCATTACTTATAGTAATAATAAAATTATTTATATAA
Upstream 100 bases:
>100_bases ATTGAAATTATGAAATGGAAAGAAATATATCAAATTTTAGAAGATACAGTGGATAATTGTGAAAAAGTGGCTAATATAGT AGAAAGAGTTGTAATTAAAA
Downstream 100 bases:
>100_bases TAATAAATACATAACATATGCAATAAAAACAATTTTATAGCTATATAATTAAAAGTGCTATCTTTGAAATAAAATGTACC TATGATTTAAGTACATTTCA
Product: phosphate permease
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MHSSLIVTILIIIFAVTFDFINGFHDTATAVATSITTRALTPKQAIIICCIFNFLGAFMGTAVAKTVGENIVSHTSIPQW VIMCVLISSIIWNLLTWYFGIPSSSSHALIGALVGAGIAYTSTLNVVNWYNLFHSVILWLFLSPVIGFIVGYILMVILNF ALKSHKRTVVNKIFLKLQVLAGAFMAFNHGGNDAQKSMGIITMALLSGGLISTFEVPAWVIFICALSMALGTSIGGKKII KTMGSGMAKLTPVNGFAAQTGAACVILTATLFHAPVSTTHIITTTIMGVGASKRFKNVKWGVAKQIVWAWVLTIPITAIF SALLIVIIKLFI
Sequences:
>Translated_332_residues MHSSLIVTILIIIFAVTFDFINGFHDTATAVATSITTRALTPKQAIIICCIFNFLGAFMGTAVAKTVGENIVSHTSIPQW VIMCVLISSIIWNLLTWYFGIPSSSSHALIGALVGAGIAYTSTLNVVNWYNLFHSVILWLFLSPVIGFIVGYILMVILNF ALKSHKRTVVNKIFLKLQVLAGAFMAFNHGGNDAQKSMGIITMALLSGGLISTFEVPAWVIFICALSMALGTSIGGKKII KTMGSGMAKLTPVNGFAAQTGAACVILTATLFHAPVSTTHIITTTIMGVGASKRFKNVKWGVAKQIVWAWVLTIPITAIF SALLIVIIKLFI >Mature_332_residues MHSSLIVTILIIIFAVTFDFINGFHDTATAVATSITTRALTPKQAIIICCIFNFLGAFMGTAVAKTVGENIVSHTSIPQW VIMCVLISSIIWNLLTWYFGIPSSSSHALIGALVGAGIAYTSTLNVVNWYNLFHSVILWLFLSPVIGFIVGYILMVILNF ALKSHKRTVVNKIFLKLQVLAGAFMAFNHGGNDAQKSMGIITMALLSGGLISTFEVPAWVIFICALSMALGTSIGGKKII KTMGSGMAKLTPVNGFAAQTGAACVILTATLFHAPVSTTHIITTTIMGVGASKRFKNVKWGVAKQIVWAWVLTIPITAIF SALLIVIIKLFI
Specific function: Low-affinity inorganic phosphate transport [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. Pit subfamily [H]
Homologues:
Organism=Homo sapiens, GI31543630, Length=172, Percent_Identity=29.0697674418605, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI5803173, Length=162, Percent_Identity=31.4814814814815, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1789360, Length=221, Percent_Identity=30.7692307692308, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1789907, Length=217, Percent_Identity=32.258064516129, Blast_Score=110, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17539280, Length=164, Percent_Identity=30.4878048780488, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI25146401, Length=171, Percent_Identity=31.5789473684211, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71981576, Length=163, Percent_Identity=30.0613496932515, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI32566716, Length=158, Percent_Identity=29.746835443038, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17536725, Length=174, Percent_Identity=25.2873563218391, Blast_Score=75, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6319773, Length=163, Percent_Identity=30.0613496932515, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356511, Length=193, Percent_Identity=26.9430051813472, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 35654; Mature: 35654
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSLIVTILIIIFAVTFDFINGFHDTATAVATSITTRALTPKQAIIICCIFNFLGAFMG CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TAVAKTVGENIVSHTSIPQWVIMCVLISSIIWNLLTWYFGIPSSSSHALIGALVGAGIAY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH TSTLNVVNWYNLFHSVILWLFLSPVIGFIVGYILMVILNFALKSHKRTVVNKIFLKLQVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAFMAFNHGGNDAQKSMGIITMALLSGGLISTFEVPAWVIFICALSMALGTSIGGKKII HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KTMGSGMAKLTPVNGFAAQTGAACVILTATLFHAPVSTTHIITTTIMGVGASKRFKNVKW HHHCCCCEEECCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCHH GVAKQIVWAWVLTIPITAIFSALLIVIIKLFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MHSSLIVTILIIIFAVTFDFINGFHDTATAVATSITTRALTPKQAIIICCIFNFLGAFMG CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TAVAKTVGENIVSHTSIPQWVIMCVLISSIIWNLLTWYFGIPSSSSHALIGALVGAGIAY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH TSTLNVVNWYNLFHSVILWLFLSPVIGFIVGYILMVILNFALKSHKRTVVNKIFLKLQVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAFMAFNHGGNDAQKSMGIITMALLSGGLISTFEVPAWVIFICALSMALGTSIGGKKII HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KTMGSGMAKLTPVNGFAAQTGAACVILTATLFHAPVSTTHIITTTIMGVGASKRFKNVKW HHHCCCCEEECCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCHH GVAKQIVWAWVLTIPITAIFSALLIVIIKLFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]