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The map label for this gene is ykaA [H]

Identifier: 187935722

GI number: 187935722

Start: 3746950

End: 3747576

Strand: Reverse

Name: ykaA [H]

Synonym: CLL_A3539

Alternate gene names: 187935722

Gene position: 3747576-3746950 (Counterclockwise)

Preceding gene: 187933812

Following gene: 187932989

Centisome position: 98.61

GC content: 24.88

Gene sequence:

>627_bases
ATGTTAAATTTTAATTGTAAAGAAGATAAATTTTACCAAATGTTATTAAAATCGGCTGAAATTGTTAATGAAACTGCTAT
TGAATTGAGAAAAAGTTTGGAGTGTTTAGATAAGAGAGAAATACAAGTAAAGAATACATCAGAATTAGAAAACATTGGTG
ATGAATTAGTTCGCACTTTAATTAAAGAATTAAATGATGCATTTATAACACCTATAGACCGAGAAGACATATATGAAATA
ATAAAAGAAATGGATAATATTTTAGATTCCATTAATTCAACAGTTCACAGATTTATAATGTTTGATATAACAGAAAGTAC
AGAGGAATTAAGAGAAATATGTAATATGTTAGTACAAGCTACTGAAGAACTTGTAGTTTTAATGAGTGAGTTAAAAATAC
ATGGTTGTAAATCTAAAAGTATAAATACTAAAATCATGAATATAAGTAAAACTGAAAGTGAAGCAGATAAGATATTTAGA
AAAACTGTACAGCAATTATTTAAGTATGAAGAGAATCCAATTGAAATTATGAAATGGAAAGAAATATATCAAATTTTAGA
AGATACAGTGGATAATTGTGAAAAAGTGGCTAATATAGTAGAAAGAGTTGTAATTAAAAATGCATAG

Upstream 100 bases:

>100_bases
TTTACTCAAACCAGTTTAAAAAATTACTACAAAAGGAATATAATTATTTTGGGGTTAAAATCAGATATAATATTTTTATA
TTAATCTAGGAGATGAAATA

Downstream 100 bases:

>100_bases
TTCGTTAATTGTAACAATACTAATAATAATTTTTGCGGTAACATTTGACTTTATAAATGGATTTCATGATACAGCTACAG
CGGTTGCAACTTCAATAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLNFNCKEDKFYQMLLKSAEIVNETAIELRKSLECLDKREIQVKNTSELENIGDELVRTLIKELNDAFITPIDREDIYEI
IKEMDNILDSINSTVHRFIMFDITESTEELREICNMLVQATEELVVLMSELKIHGCKSKSINTKIMNISKTESEADKIFR
KTVQQLFKYEENPIEIMKWKEIYQILEDTVDNCEKVANIVERVVIKNA

Sequences:

>Translated_208_residues
MLNFNCKEDKFYQMLLKSAEIVNETAIELRKSLECLDKREIQVKNTSELENIGDELVRTLIKELNDAFITPIDREDIYEI
IKEMDNILDSINSTVHRFIMFDITESTEELREICNMLVQATEELVVLMSELKIHGCKSKSINTKIMNISKTESEADKIFR
KTVQQLFKYEENPIEIMKWKEIYQILEDTVDNCEKVANIVERVVIKNA
>Mature_208_residues
MLNFNCKEDKFYQMLLKSAEIVNETAIELRKSLECLDKREIQVKNTSELENIGDELVRTLIKELNDAFITPIDREDIYEI
IKEMDNILDSINSTVHRFIMFDITESTEELREICNMLVQATEELVVLMSELKIHGCKSKSINTKIMNISKTESEADKIFR
KTVQQLFKYEENPIEIMKWKEIYQILEDTVDNCEKVANIVERVVIKNA

Specific function: Unknown

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR018445 [H]

Pfam domain/function: PF01865 PhoU_div [H]

EC number: NA

Molecular weight: Translated: 24391; Mature: 24391

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFNCKEDKFYQMLLKSAEIVNETAIELRKSLECLDKREIQVKNTSELENIGDELVRTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IKELNDAFITPIDREDIYEIIKEMDNILDSINSTVHRFIMFDITESTEELREICNMLVQA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEELVVLMSELKIHGCKSKSINTKIMNISKTESEADKIFRKTVQQLFKYEENPIEIMKWK
HHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EIYQILEDTVDNCEKVANIVERVVIKNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNFNCKEDKFYQMLLKSAEIVNETAIELRKSLECLDKREIQVKNTSELENIGDELVRTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IKELNDAFITPIDREDIYEIIKEMDNILDSINSTVHRFIMFDITESTEELREICNMLVQA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEELVVLMSELKIHGCKSKSINTKIMNISKTESEADKIFRKTVQQLFKYEENPIEIMKWK
HHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EIYQILEDTVDNCEKVANIVERVVIKNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]