| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932940
Identifier: 187932940
GI number: 187932940
Start: 779325
End: 779855
Strand: Reverse
Name: 187932940
Synonym: CLL_A0767
Alternate gene names: NA
Gene position: 779855-779325 (Counterclockwise)
Preceding gene: 187934512
Following gene: 187934106
Centisome position: 20.52
GC content: 22.98
Gene sequence:
>531_bases ATGAAACCAGATAAAAAATATATGAATATTGAATGTAATAATGATTTTGATTATAATTTTGTCCCACTAAAAAACAATTT TAATTTTCGCTGTAATCAATCATCATTAACACCCTTTTTTAAAGTTAATAATTCTCTCTTTGATGGTGAGCCTAATAATA ATTTTGATTTTAGAAGTGATATTAATTCTTCTAATTTATTTCCAGATGAAACTATGCAATCACAACTATATTGCTATATT AATCAACTAGATAAAAATTGTAATAAAAAAAGTGATGTTATGAAAAAAGATACTTCAAATGAATTAACTCCTGATAAAGT GCTTAGAGGATTTGATTTAGATTTAAATGAAAGTGAAGATTTAGAAAGAATTAATTCTGATAATGATGTTAATAGAATTT ATTTAAAAATTGAAGAAAAGAATCCCAATCTATTAAATACTCTTTCAGTTTATGGAATTCCTTATCCAATAGCTAGAGTA ATCATTAAAAGGATAATAAAATTATCATTACAATACTATAAGGAAAGGTAG
Upstream 100 bases:
>100_bases AAGTAATATCTATGTCTATGAATTCATATTATAAAGTGTAACAAATAGTCCTTTATACTCATATAGTTATTAAGAAAATA TATGGAGGTATCGTATAAAA
Downstream 100 bases:
>100_bases GTGAAATTTTATGTTTTTATTTAGAAATTCATTTCCAGATATAAAATCAAACATTAGATTTCTGCATGCTATTCCTGAAT CTATAAGTGTAGATATCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKPDKKYMNIECNNDFDYNFVPLKNNFNFRCNQSSLTPFFKVNNSLFDGEPNNNFDFRSDINSSNLFPDETMQSQLYCYI NQLDKNCNKKSDVMKKDTSNELTPDKVLRGFDLDLNESEDLERINSDNDVNRIYLKIEEKNPNLLNTLSVYGIPYPIARV IIKRIIKLSLQYYKER
Sequences:
>Translated_176_residues MKPDKKYMNIECNNDFDYNFVPLKNNFNFRCNQSSLTPFFKVNNSLFDGEPNNNFDFRSDINSSNLFPDETMQSQLYCYI NQLDKNCNKKSDVMKKDTSNELTPDKVLRGFDLDLNESEDLERINSDNDVNRIYLKIEEKNPNLLNTLSVYGIPYPIARV IIKRIIKLSLQYYKER >Mature_176_residues MKPDKKYMNIECNNDFDYNFVPLKNNFNFRCNQSSLTPFFKVNNSLFDGEPNNNFDFRSDINSSNLFPDETMQSQLYCYI NQLDKNCNKKSDVMKKDTSNELTPDKVLRGFDLDLNESEDLERINSDNDVNRIYLKIEEKNPNLLNTLSVYGIPYPIARV IIKRIIKLSLQYYKER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20813; Mature: 20813
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDKKYMNIECNNDFDYNFVPLKNNFNFRCNQSSLTPFFKVNNSLFDGEPNNNFDFRSD CCCCCCEEEEEECCCCCCEEEEECCCCCEEECCCCCCEEEEECCCEECCCCCCCCCCCCC INSSNLFPDETMQSQLYCYINQLDKNCNKKSDVMKKDTSNELTPDKVLRGFDLDLNESED CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHH LERINSDNDVNRIYLKIEEKNPNLLNTLSVYGIPYPIARVIIKRIIKLSLQYYKER HHHCCCCCCCEEEEEEEECCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPDKKYMNIECNNDFDYNFVPLKNNFNFRCNQSSLTPFFKVNNSLFDGEPNNNFDFRSD CCCCCCEEEEEECCCCCCEEEEECCCCCEEECCCCCCEEEEECCCEECCCCCCCCCCCCC INSSNLFPDETMQSQLYCYINQLDKNCNKKSDVMKKDTSNELTPDKVLRGFDLDLNESED CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHH LERINSDNDVNRIYLKIEEKNPNLLNTLSVYGIPYPIARVIIKRIIKLSLQYYKER HHHCCCCCCCEEEEEEEECCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA