| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932928
Identifier: 187932928
GI number: 187932928
Start: 3634448
End: 3635704
Strand: Reverse
Name: 187932928
Synonym: CLL_A3437
Alternate gene names: NA
Gene position: 3635704-3634448 (Counterclockwise)
Preceding gene: 187933947
Following gene: 187932353
Centisome position: 95.67
GC content: 29.2
Gene sequence:
>1257_bases ATGGCTGTAGTTAGACCTTTTAAAAGTATCAGACCAATTAGCGATTTAGCATCAAAAATAGCAGCTTTACCTTATGATGT TATGAATAGTGAGGAAGCGCGAGATATGGCAAAGGGAAACCAATATTCGTTTCTTCATATTGATAGAGCAGAAATAGATT TAGATCCTTCAATAGATGTACATGATAAAAAAGTTTATGAAAAAGCGAGAGACAATTTAAATAAAATGATTGATGATGGT GAGTATATACAAGATATTAATCCTTGTCTGTATATATATAGACAAATAATGGATGGGAGATCTCAAACAGGAATAGTATT TTGCGCATCTATTGATGATTATCTTAATGGTGTTATAAAAAAGCATGAATTTACTAGACAAGATAAAGAAGATGATAGAA TAAGGCATGTTGATTGTTGTAATGCAAATACAGGTCCTATATTTTTAACTTATAAAGAAGATCAAATTGCATCAGAAATT ATCCAAGCATGGATTGAAAATGAAAGTAAAAGAAAACCTTTATATAATTTTGTATCAGAAGACGGGATTACTCATGTTGT TTGGGCAATTGATAATGAAATCATAATAGATGAAATAATAGATCTATTTAAAGAAATAGATTATTTGTATATAGCAGATG GACATCATAGATCGGCTTCAGCAGTTGAAGTTGGATTAAAGAGAAGGAAAGAAAATCCTGATTATACTGGAGAAGAAGAA TTTAATTATTTTTTAGCAGTAGCATTTCCAGATAATGATTTAATGGTAATGGATTATAATAGGGTAGTTAAAGATTTAAA TGGATTAACTAAAAGTGAATTTCTAGATAAATTAGAAAGTAAATTTGATATATGTAATGCACCAACTAAGGAGCCATTTA AACCATATAAAAAGCATATGTTTGGTATGTATTTAGAAAATAAGTGGTATGTATTAGAAGCTAAAGAAGGAACTTTTAAT GCAAGAGATCCAATATTAAGCCTTGATGTATCAATATTACAACAAAATATATTAACTCCTATATTAGGAATAGAAGATGT ACGAACATCTGATAGAATAGATTTTATTGGTGGAATAAGAGGACTAAAAGAATTGGAACATAGAGCAAATACTGATATGA AAATAGCTTTTTCAATGTATCCAACAGAAGTTAGAGATATACTGAAAGTAGCAGATATTGGTGAGGTAATGCCTCCAAAA TCTACATGGTTTGAGCCAAAATTAAGGAGTGGACTATTTGTTCATAAATTAAAGTAG
Upstream 100 bases:
>100_bases GGATTTTAAGTAATGTTAATACATTTTATTTTAAATGAATTTTAAAATAGGGATTTATATATATAATAAAAATATTTTAA ATAATTAGGAGGAAGTTTAA
Downstream 100 bases:
>100_bases AAGTTTCAAAAAACTTACTATATAGAAAGAAAATTTATTAAAGTAGAAAATATTGAGTAAAATAGAAAAGAAATAAAAGC AGAAAAAGTAACAAAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MAVVRPFKSIRPISDLASKIAALPYDVMNSEEARDMAKGNQYSFLHIDRAEIDLDPSIDVHDKKVYEKARDNLNKMIDDG EYIQDINPCLYIYRQIMDGRSQTGIVFCASIDDYLNGVIKKHEFTRQDKEDDRIRHVDCCNANTGPIFLTYKEDQIASEI IQAWIENESKRKPLYNFVSEDGITHVVWAIDNEIIIDEIIDLFKEIDYLYIADGHHRSASAVEVGLKRRKENPDYTGEEE FNYFLAVAFPDNDLMVMDYNRVVKDLNGLTKSEFLDKLESKFDICNAPTKEPFKPYKKHMFGMYLENKWYVLEAKEGTFN ARDPILSLDVSILQQNILTPILGIEDVRTSDRIDFIGGIRGLKELEHRANTDMKIAFSMYPTEVRDILKVADIGEVMPPK STWFEPKLRSGLFVHKLK
Sequences:
>Translated_418_residues MAVVRPFKSIRPISDLASKIAALPYDVMNSEEARDMAKGNQYSFLHIDRAEIDLDPSIDVHDKKVYEKARDNLNKMIDDG EYIQDINPCLYIYRQIMDGRSQTGIVFCASIDDYLNGVIKKHEFTRQDKEDDRIRHVDCCNANTGPIFLTYKEDQIASEI IQAWIENESKRKPLYNFVSEDGITHVVWAIDNEIIIDEIIDLFKEIDYLYIADGHHRSASAVEVGLKRRKENPDYTGEEE FNYFLAVAFPDNDLMVMDYNRVVKDLNGLTKSEFLDKLESKFDICNAPTKEPFKPYKKHMFGMYLENKWYVLEAKEGTFN ARDPILSLDVSILQQNILTPILGIEDVRTSDRIDFIGGIRGLKELEHRANTDMKIAFSMYPTEVRDILKVADIGEVMPPK STWFEPKLRSGLFVHKLK >Mature_417_residues AVVRPFKSIRPISDLASKIAALPYDVMNSEEARDMAKGNQYSFLHIDRAEIDLDPSIDVHDKKVYEKARDNLNKMIDDGE YIQDINPCLYIYRQIMDGRSQTGIVFCASIDDYLNGVIKKHEFTRQDKEDDRIRHVDCCNANTGPIFLTYKEDQIASEII QAWIENESKRKPLYNFVSEDGITHVVWAIDNEIIIDEIIDLFKEIDYLYIADGHHRSASAVEVGLKRRKENPDYTGEEEF NYFLAVAFPDNDLMVMDYNRVVKDLNGLTKSEFLDKLESKFDICNAPTKEPFKPYKKHMFGMYLENKWYVLEAKEGTFNA RDPILSLDVSILQQNILTPILGIEDVRTSDRIDFIGGIRGLKELEHRANTDMKIAFSMYPTEVRDILKVADIGEVMPPKS TWFEPKLRSGLFVHKLK
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48333; Mature: 48201
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVRPFKSIRPISDLASKIAALPYDVMNSEEARDMAKGNQYSFLHIDRAEIDLDPSIDV CCCCCCHHHCCCHHHHHHHHHHCCHHHCCCHHHHHHHCCCCEEEEEEECCEECCCCCCCC HDKKVYEKARDNLNKMIDDGEYIQDINPCLYIYRQIMDGRSQTGIVFCASIDDYLNGVIK HHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHH KHEFTRQDKEDDRIRHVDCCNANTGPIFLTYKEDQIASEIIQAWIENESKRKPLYNFVSE HHHHHCCCCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHC DGITHVVWAIDNEIIIDEIIDLFKEIDYLYIADGHHRSASAVEVGLKRRKENPDYTGEEE CCCEEEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC FNYFLAVAFPDNDLMVMDYNRVVKDLNGLTKSEFLDKLESKFDICNAPTKEPFKPYKKHM CCEEEEEEECCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH FGMYLENKWYVLEAKEGTFNARDPILSLDVSILQQNILTPILGIEDVRTSDRIDFIGGIR HHEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHH GLKELEHRANTDMKIAFSMYPTEVRDILKVADIGEVMPPKSTWFEPKLRSGLFVHKLK HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECC >Mature Secondary Structure AVVRPFKSIRPISDLASKIAALPYDVMNSEEARDMAKGNQYSFLHIDRAEIDLDPSIDV CCCCCHHHCCCHHHHHHHHHHCCHHHCCCHHHHHHHCCCCEEEEEEECCEECCCCCCCC HDKKVYEKARDNLNKMIDDGEYIQDINPCLYIYRQIMDGRSQTGIVFCASIDDYLNGVIK HHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHH KHEFTRQDKEDDRIRHVDCCNANTGPIFLTYKEDQIASEIIQAWIENESKRKPLYNFVSE HHHHHCCCCCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHC DGITHVVWAIDNEIIIDEIIDLFKEIDYLYIADGHHRSASAVEVGLKRRKENPDYTGEEE CCCEEEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC FNYFLAVAFPDNDLMVMDYNRVVKDLNGLTKSEFLDKLESKFDICNAPTKEPFKPYKKHM CCEEEEEEECCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH FGMYLENKWYVLEAKEGTFNARDPILSLDVSILQQNILTPILGIEDVRTSDRIDFIGGIR HHEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHH GLKELEHRANTDMKIAFSMYPTEVRDILKVADIGEVMPPKSTWFEPKLRSGLFVHKLK HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA