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The map label for this gene is dhaB [H]

Identifier: 187932789

GI number: 187932789

Start: 2199758

End: 2201422

Strand: Reverse

Name: dhaB [H]

Synonym: CLL_A2105

Alternate gene names: 187932789

Gene position: 2201422-2199758 (Counterclockwise)

Preceding gene: 187933561

Following gene: 187933731

Centisome position: 57.93

GC content: 34.65

Gene sequence:

>1665_bases
GTGAAATCAAAAAGATTCCAGGTTCTAGCAAAACGTCCTGTAAATCAAGATGGTCTTATTGGAGAATGGCCAGAAGAGGG
GTTAGTAGCAATGAATAGCGCTAATGATCCAAAATCTTCAATAAAAATTGAAAATGGAAAAGTAGTAGAGTTAGATAACA
AAAAAAGAGAAGACTTTGATATGATAGATAGATTTATAGCTGACTATGCAATCAACTTAGAAAATGCAGAAAAAGCTATG
AGTTTAGATTCAGTAGAAATAGCAAAAAAACTTGTAGATATAAATGTTAGTAGAGATGAAATAGTTAATATAACAACATC
TATAACACCAGCTAAGGTAGTAGAAGTTGTGTCACACATGAACGTTGTTGAAATGATGATGGCTCTTCAAAAAATGAGAG
CAAGAAAAACACCATCAAATCAATGTCACGTTACAAACTTAAAAGATAATCCAGTGCAAATTGCAGCAGATGCAGCAGAA
GCAGGGATAAGAGGCTTTTCAGAACAAGAAACTACAGTTGGTATAGTTAGATATGCTCCATTTAATGCATTAGCTATATT
AATAGGTTCACAAGTAGGTCGTGGAGGAGTTTTAACTCAATGTTCAGTTGAAGAAGCTACAGAACTTGACCTTGGTATGA
GAGGACTTACAAGTTATGCAGAAACAGTTTCAGTATATGGAACTGAAGCAGTATTTACAGATGGAGATGATACTCCATGG
TCAAAGGCGTTCTTAGCATCAGCTTATGCTTCAAGAGGTCTTAAAATGAGATATACATCAGGTACAGGTTCAGAAGCATT
AATGGGATATTCAGAAGGAAAATCAATGCTTTACCTAGAGTCAAGATGTATATACATAACTAAGGGTGCTGGAGTTCAAG
GACTTCAAAATGGTGCAGTTAGTTGTATAGGTATGACAGGAGCAGTTCCATCAGGAATAAGAGCAGTACTTGCTGAAAAC
TTAATAGCAGCAATGCTTGATATAGAAGTTGCATCAGCAAATGACCAAACTTTCTCACATTCAGATATAAGAAGAACAGC
AAGAACATTAATGCAAATGCTACCAGGAACAGACTTCATATTCTCAGGATATAGTGCAGTTCCAAACTATGATAACATGT
TTGCAGGTTCAAACTTTGATGCTGAAGATTTTGATGATTACAACGTTCTTCAAAGAGACTTAATGGTAGATGGTGGATTA
AGACCAGTATCAGAAGAAGAAACAATTGCAATTAGAAATAAAGCAGCAAAATCAATACAAGCAGTATTTAGAGAATTAGG
CTTCCCTGCTATAACTGATGAAGAAGTTGAAGCAGCAACTTATGCTCATGGAAGTAAAGATATGCCTGAAAGAAACATAG
TTGAAGACTTAAAGGCAGCAGAAGAAATGCTTAAGAAGAGAATAAATGGATTAGATATAGTTAAAGCATTAAGCACTAGT
GGATTTGATGATGTTGCAAGCAACATATTAAACATGCTTAAGCAAAGAGTGACTGGTGATTACTTACAAACATCAGCTAT
ATTAGATAATGATTTTGATGTTATAAGTGCAGTTAATGATAAAAATGACTATATGGGACCAGGAACTGGTTATAGAATTA
GTCCAGAGAGATGGGAAGAAATAAAGAACATTCCTAACGTAATAAAACCAGAAGATATAGATTAA

Upstream 100 bases:

>100_bases
AATTTGTGATGGAATTTAAGTATATGTATATTATAATCTAGACATAGATAAAAAAATAACAAGCATTTTGAATATAATTT
TTACAAGGGAGGAAATATAA

Downstream 100 bases:

>100_bases
GGGTAGAGGTGAGCAACAATGGAAAATACAACAAATCAATATGTTATGCCAAAGCTTCAGCTTACTGAAGTAGGAGAAGC
AAAAGTTGGAACTAAGGTAG

Product: glycerol dehydratase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MKSKRFQVLAKRPVNQDGLIGEWPEEGLVAMNSANDPKSSIKIENGKVVELDNKKREDFDMIDRFIADYAINLENAEKAM
SLDSVEIAKKLVDINVSRDEIVNITTSITPAKVVEVVSHMNVVEMMMALQKMRARKTPSNQCHVTNLKDNPVQIAADAAE
AGIRGFSEQETTVGIVRYAPFNALAILIGSQVGRGGVLTQCSVEEATELDLGMRGLTSYAETVSVYGTEAVFTDGDDTPW
SKAFLASAYASRGLKMRYTSGTGSEALMGYSEGKSMLYLESRCIYITKGAGVQGLQNGAVSCIGMTGAVPSGIRAVLAEN
LIAAMLDIEVASANDQTFSHSDIRRTARTLMQMLPGTDFIFSGYSAVPNYDNMFAGSNFDAEDFDDYNVLQRDLMVDGGL
RPVSEEETIAIRNKAAKSIQAVFRELGFPAITDEEVEAATYAHGSKDMPERNIVEDLKAAEEMLKKRINGLDIVKALSTS
GFDDVASNILNMLKQRVTGDYLQTSAILDNDFDVISAVNDKNDYMGPGTGYRISPERWEEIKNIPNVIKPEDID

Sequences:

>Translated_554_residues
MKSKRFQVLAKRPVNQDGLIGEWPEEGLVAMNSANDPKSSIKIENGKVVELDNKKREDFDMIDRFIADYAINLENAEKAM
SLDSVEIAKKLVDINVSRDEIVNITTSITPAKVVEVVSHMNVVEMMMALQKMRARKTPSNQCHVTNLKDNPVQIAADAAE
AGIRGFSEQETTVGIVRYAPFNALAILIGSQVGRGGVLTQCSVEEATELDLGMRGLTSYAETVSVYGTEAVFTDGDDTPW
SKAFLASAYASRGLKMRYTSGTGSEALMGYSEGKSMLYLESRCIYITKGAGVQGLQNGAVSCIGMTGAVPSGIRAVLAEN
LIAAMLDIEVASANDQTFSHSDIRRTARTLMQMLPGTDFIFSGYSAVPNYDNMFAGSNFDAEDFDDYNVLQRDLMVDGGL
RPVSEEETIAIRNKAAKSIQAVFRELGFPAITDEEVEAATYAHGSKDMPERNIVEDLKAAEEMLKKRINGLDIVKALSTS
GFDDVASNILNMLKQRVTGDYLQTSAILDNDFDVISAVNDKNDYMGPGTGYRISPERWEEIKNIPNVIKPEDID
>Mature_554_residues
MKSKRFQVLAKRPVNQDGLIGEWPEEGLVAMNSANDPKSSIKIENGKVVELDNKKREDFDMIDRFIADYAINLENAEKAM
SLDSVEIAKKLVDINVSRDEIVNITTSITPAKVVEVVSHMNVVEMMMALQKMRARKTPSNQCHVTNLKDNPVQIAADAAE
AGIRGFSEQETTVGIVRYAPFNALAILIGSQVGRGGVLTQCSVEEATELDLGMRGLTSYAETVSVYGTEAVFTDGDDTPW
SKAFLASAYASRGLKMRYTSGTGSEALMGYSEGKSMLYLESRCIYITKGAGVQGLQNGAVSCIGMTGAVPSGIRAVLAEN
LIAAMLDIEVASANDQTFSHSDIRRTARTLMQMLPGTDFIFSGYSAVPNYDNMFAGSNFDAEDFDDYNVLQRDLMVDGGL
RPVSEEETIAIRNKAAKSIQAVFRELGFPAITDEEVEAATYAHGSKDMPERNIVEDLKAAEEMLKKRINGLDIVKALSTS
GFDDVASNILNMLKQRVTGDYLQTSAILDNDFDVISAVNDKNDYMGPGTGYRISPERWEEIKNIPNVIKPEDID

Specific function: Unknown

COG id: COG4909

COG function: function code Q; Propanediol dehydratase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the diol/glycerol dehydratase large subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016176
- InterPro:   IPR003206
- ProDom:   PD025428 [H]

Pfam domain/function: PF02286 Dehydratase_LU [H]

EC number: =4.2.1.30 [H]

Molecular weight: Translated: 60590; Mature: 60590

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKRFQVLAKRPVNQDGLIGEWPEEGLVAMNSANDPKSSIKIENGKVVELDNKKREDFD
CCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEEECCCCCCCHH
MIDRFIADYAINLENAEKAMSLDSVEIAKKLVDINVSRDEIVNITTSITPAKVVEVVSHM
HHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHEEEEECCCCHHHHHHHHHHH
NVVEMMMALQKMRARKTPSNQCHVTNLKDNPVQIAADAAEAGIRGFSEQETTVGIVRYAP
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECHHHHHHCCCCCCCCEEEEEEECC
FNALAILIGSQVGRGGVLTQCSVEEATELDLGMRGLTSYAETVSVYGTEAVFTDGDDTPW
HHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCH
SKAFLASAYASRGLKMRYTSGTGSEALMGYSEGKSMLYLESRCIYITKGAGVQGLQNGAV
HHHHHHHHHHHCCEEEEEECCCCCHHHEECCCCCEEEEEECEEEEEECCCCCCCCCCCCE
SCIGMTGAVPSGIRAVLAENLIAAMLDIEVASANDQTFSHSDIRRTARTLMQMLPGTDFI
EEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
FSGYSAVPNYDNMFAGSNFDAEDFDDYNVLQRDLMVDGGLRPVSEEETIAIRNKAAKSIQ
ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH
AVFRELGFPAITDEEVEAATYAHGSKDMPERNIVEDLKAAEEMLKKRINGLDIVKALSTS
HHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
GFDDVASNILNMLKQRVTGDYLQTSAILDNDFDVISAVNDKNDYMGPGTGYRISPERWEE
CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCHHHHHH
IKNIPNVIKPEDID
HHCCCCCCCCCCCC
>Mature Secondary Structure
MKSKRFQVLAKRPVNQDGLIGEWPEEGLVAMNSANDPKSSIKIENGKVVELDNKKREDFD
CCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEEECCCCCCCHH
MIDRFIADYAINLENAEKAMSLDSVEIAKKLVDINVSRDEIVNITTSITPAKVVEVVSHM
HHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHEEEEECCCCHHHHHHHHHHH
NVVEMMMALQKMRARKTPSNQCHVTNLKDNPVQIAADAAEAGIRGFSEQETTVGIVRYAP
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECHHHHHHCCCCCCCCEEEEEEECC
FNALAILIGSQVGRGGVLTQCSVEEATELDLGMRGLTSYAETVSVYGTEAVFTDGDDTPW
HHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCH
SKAFLASAYASRGLKMRYTSGTGSEALMGYSEGKSMLYLESRCIYITKGAGVQGLQNGAV
HHHHHHHHHHHCCEEEEEECCCCCHHHEECCCCCEEEEEECEEEEEECCCCCCCCCCCCE
SCIGMTGAVPSGIRAVLAENLIAAMLDIEVASANDQTFSHSDIRRTARTLMQMLPGTDFI
EEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
FSGYSAVPNYDNMFAGSNFDAEDFDDYNVLQRDLMVDGGLRPVSEEETIAIRNKAAKSIQ
ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH
AVFRELGFPAITDEEVEAATYAHGSKDMPERNIVEDLKAAEEMLKKRINGLDIVKALSTS
HHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
GFDDVASNILNMLKQRVTGDYLQTSAILDNDFDVISAVNDKNDYMGPGTGYRISPERWEE
CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCHHHHHH
IKNIPNVIKPEDID
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8824629 [H]