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The map label for this gene is ybaB [C]

Identifier: 187932720

GI number: 187932720

Start: 3643118

End: 3643459

Strand: Reverse

Name: ybaB [C]

Synonym: CLL_A3446

Alternate gene names: 187932720

Gene position: 3643459-3643118 (Counterclockwise)

Preceding gene: 187933489

Following gene: 187935036

Centisome position: 95.87

GC content: 35.96

Gene sequence:

>342_bases
ATGGCAAAAGGAGGATTCCCTGGAGGTTTCGGGGGAGGAAATATGAATAACCTTATGAAACAAGCGCAAAAGCTTCAAAA
GCAAATGGAAGATATGCAAAAAGATCTTGAAACAAAGGAATTTGAAACATCAGTAGGTGGTGGTGCTGTTTCTGTAACAG
TAACTGGTAAAAAAGAAGTTAAATCTATTAATATAAAGCCAGAAGTAGTAGATCCAGATGATGTAGAAATGCTTGAGGAT
CTAGTACTTACAGCAGTTAATGAAGCTTTAAGAAAAGCAGAAGAAGAAACTGCTAGTAAAATGGGAAAATTAACTGGTGG
AATGCCAGGAGGATTATTTTAA

Upstream 100 bases:

>100_bases
TTTTGAAATATTAGACGAATAGAATCAATATTTTAATGTAGTAAACAATAAGAAAATGTTTTATAATAGAGAGTAGAAAT
TTATTAAGAGGAGGATTTGT

Downstream 100 bases:

>100_bases
ATAATAAAATAAAATATTATCTAATAAAATCCCAAGTAAAAATAAAGCATACAGAATAGAGGAAATTCCTTAAAGCTGTA
TGCTTTTAACTATCTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAKGGFPGGFGGGNMNNLMKQAQKLQKQMEDMQKDLETKEFETSVGGGAVSVTVTGKKEVKSINIKPEVVDPDDVEMLED
LVLTAVNEALRKAEEETASKMGKLTGGMPGGLF

Sequences:

>Translated_113_residues
MAKGGFPGGFGGGNMNNLMKQAQKLQKQMEDMQKDLETKEFETSVGGGAVSVTVTGKKEVKSINIKPEVVDPDDVEMLED
LVLTAVNEALRKAEEETASKMGKLTGGMPGGLF
>Mature_112_residues
AKGGFPGGFGGGNMNNLMKQAQKLQKQMEDMQKDLETKEFETSVGGGAVSVTVTGKKEVKSINIKPEVVDPDDVEMLEDL
VLTAVNEALRKAEEETASKMGKLTGGMPGGLF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=99, Percent_Identity=42.4242424242424, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3225_CLOBA (B2V0W1)

Other databases:

- EMBL:   CP001078
- RefSeq:   YP_001922590.1
- ProteinModelPortal:   B2V0W1
- GeneID:   6317420
- GenomeReviews:   CP001078_GR
- KEGG:   cbt:CLH_3225
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12021; Mature: 11890

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGGFPGGFGGGNMNNLMKQAQKLQKQMEDMQKDLETKEFETSVGGGAVSVTVTGKKEV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
KSINIKPEVVDPDDVEMLEDLVLTAVNEALRKAEEETASKMGKLTGGMPGGLF
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKGGFPGGFGGGNMNNLMKQAQKLQKQMEDMQKDLETKEFETSVGGGAVSVTVTGKKEV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
KSINIKPEVVDPDDVEMLEDLVLTAVNEALRKAEEETASKMGKLTGGMPGGLF
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA