Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is 187932611

Identifier: 187932611

GI number: 187932611

Start: 3102920

End: 3103843

Strand: Reverse

Name: 187932611

Synonym: CLL_A3005

Alternate gene names: NA

Gene position: 3103843-3102920 (Counterclockwise)

Preceding gene: 187935336

Following gene: 187932914

Centisome position: 81.67

GC content: 28.79

Gene sequence:

>924_bases
ATGAATAAGAATAATAAATTAGACAGTTTAATAAAATCAGCTATGGATGATAGTGCTAATAACATTAAAGCATCAAAAGA
TATTTTTAATGATGCTTGGAATAAAAAAGAACAAGGAGTGACTAATATGAGTTATTTTAAAATAAAAAATATAAAGAGAG
CGGCATTGATCACTGCATGTTGTGCAGCATTTTCTATTGTTGGAATCTTTACAATTTCACCAGAAGTTAGAGCAGCCGCA
CAGGAAGTCTTTAGAACAATATTTATACCTGATGAATCTGGTAATATTGTAGAAAGATCAGAAGATGAAATCATTGAAAA
TCATAACATTGGTGGCGTAATGATAACGGACTCAAATAAGACGGATATGGAAAAAAGGTTTGGGTTTACATTTAATTTTC
CTGAAAAAATTGGTGAGTATCTCACTGAAAAACATGAGGGTCGCTCCATTCCACCTATAGCTGGTATAACTATTTACGAT
ATAAAATATAAAGATACCCAAGATTTGAATAATAGATTTATGAAAGCAATAGATGATGACAAAACTTTTGAAGAACTTAA
AGATTACAATATGGAAAGATACGTTTGTTCATCATCATATGTAGATAATCAAGGACACAAATTTTGGATATATCTATCAA
AATATAGTTCGAATTCAAAAATGAATCTTGTAAAAGAAGTAAGTATTGATAATATAAAATGTAGAATTCTAGAAAGAACA
GATGCTGAATATGATATAAAAATTAGTGATGATTCTTGGAGGGATGATATGACAAAGAAACCAACTAGTGTTGATAAAAA
TTATTATATAGAATGGAATTATGATGGAGTAAGATATTGCCTATATATTGGAAATGATTCTTCTCATGCTGATGCAGCAA
TACAATTTGCAGAAGATTATATAAAAATTTTGAAGCAATCATAG

Upstream 100 bases:

>100_bases
GCAATTGGGTGATTGTTTTGAAAATCAAAATCATCTAGTAGAAGTTAAATGCAAACAAGTATAGTGTAAGCTAACTATAT
AGATAAAGGAGTGTAGTAGA

Downstream 100 bases:

>100_bases
AATAAAATATAAATATAAAAAAGTAGAATATGATTAATAAAATGAGCATCAAAAAGATGCTCATTTTTATTTATATGTAT
TATTTTTGTTGATTTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITACCAAFSIVGIFTISPEVRAAA
QEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNKTDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYD
IKYKDTQDLNNRFMKAIDDDKTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT
DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDYIKILKQS

Sequences:

>Translated_307_residues
MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITACCAAFSIVGIFTISPEVRAAA
QEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNKTDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYD
IKYKDTQDLNNRFMKAIDDDKTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT
DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDYIKILKQS
>Mature_307_residues
MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITACCAAFSIVGIFTISPEVRAAA
QEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNKTDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYD
IKYKDTQDLNNRFMKAIDDDKTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT
DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDYIKILKQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35447; Mature: 35447

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITAC
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHH
CAAFSIVGIFTISPEVRAAAQEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNK
HHHHHHHEEEEECHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHCCCCCEEEEECCCC
TDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYDIKYKDTQDLNNRFMKAIDDD
CCHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCC
KTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT
HHHHHHHHCCCHHEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECC
DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDY
CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH
IKILKQS
HHHHHCC
>Mature Secondary Structure
MNKNNKLDSLIKSAMDDSANNIKASKDIFNDAWNKKEQGVTNMSYFKIKNIKRAALITAC
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHH
CAAFSIVGIFTISPEVRAAAQEVFRTIFIPDESGNIVERSEDEIIENHNIGGVMITDSNK
HHHHHHHEEEEECHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHCCCCCEEEEECCCC
TDMEKRFGFTFNFPEKIGEYLTEKHEGRSIPPIAGITIYDIKYKDTQDLNNRFMKAIDDD
CCHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCC
KTFEELKDYNMERYVCSSSYVDNQGHKFWIYLSKYSSNSKMNLVKEVSIDNIKCRILERT
HHHHHHHHCCCHHEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECC
DAEYDIKISDDSWRDDMTKKPTSVDKNYYIEWNYDGVRYCLYIGNDSSHADAAIQFAEDY
CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH
IKILKQS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA