| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is pyk [H]
Identifier: 187932499
GI number: 187932499
Start: 556394
End: 557812
Strand: Reverse
Name: pyk [H]
Synonym: CLL_A0557
Alternate gene names: 187932499
Gene position: 557812-556394 (Counterclockwise)
Preceding gene: 187932735
Following gene: 187934019
Centisome position: 14.68
GC content: 33.12
Gene sequence:
>1419_bases ATGCAAAAAACTAAAATGATTTTTACTATTGGACCTGCAAGTGATAATGAGGAGATCATAAGGAAATTTATAGGAATTGG TATGAATGCGGCAAGATTAAATTTTTCGCATGGTACTTATGAATCACACAGAGAGAAGATAGAATTAATAAAAAAAGTAA GAGAAGATATGGGAACTCCGACTGCGATAGTCTTAGACATAAAAGGACCTAAGATAAGAACACATAACTTTGTAAATGAT GGGGTAGAATTAAAAACTGGTCAAGAATTCTGTTTCGTATGCGGAGATGAACTTCTTGGTGATGAAGAAAGATGTTCTAT TACTTATGAAGAGCTTTATAAAGACATACAAGTGGGTGGAGAAATTCTTGTTGATGATGGTCTTTTAAGATTTAAAGTTA TAGCTGTTGAAGGCAAATCTATTAGATGTGCTGTAACAGTTGGTGGAATGATTAAAAATCACAAAGGTGTTAACGTTCCC AACGTAATAATAAGACTACCTTCAGTAACAGAAAAAGATATAGCTGATATAAAATTTGGTTGTGAAATGGGTGTAGACTT TATAGCAGCATCTTTCATAAGAAAAGCTAGCGATGTAGCTGATGTAAAGAAGATACTTTCTGAAAATAATGGTAAACATA TTAAAGTAATAGCTAAAATTGAAAATCAAGAAGGCGTAGATAACATAGATTCTATAATAGAACAAACTGACGCTGTAATG GTTGCTAGAGGAGATATGGGAGTTGAAATTCCTATTCAAAAAGTTCCTATAATTCAAAAAATGATAATTAGAAAATGTAA TGATTCAGGAAAATTCGTTGTAACAGCAACTCAAATGCTTGATTCAATGATTAGAAACTCTTTACCAACTAGAGCAGAGG CAAGTGATATTTGCAATGCTATATTTGATGGAACTGATGCTATAATGTTAAGTGGTGAAAGTGCCTCTGGAAATTTCCCA ATTGAGGCAGCTACAACAATGTCTGAGATTGCGCAAGAAGCAGAAGCTCATTTAGATTATGCTCACTTAACAGCAAGGTT AAGAGAACCCTCTCTTACTGATTATTCTGGTGCAATAAGTTATACAGCTTGTAGAACTTCAAATTTATTAAATGCAGCTG CAATAGTAGCTGCTACTAAAAGTGGTGCTACAGCTACTATGATTTCAAGATATAGACCAAAATCTCCTGTTATAGCAATA ACTCCTTATGAACAAGTAAGAAGAAGTTTAGCTTTAACTTTTGGTGTATTACCAATGCTTTGCGAAATGTATAATACTAC TGATGAAATCTTAGTGGAAGCTAGAAGATCAGTGTTTGAATTAAATTTTGCTTTACCTGGTGATGATATTGTAGTTGCTG CTGGAATGCCAACAACTCAAACTGGTGGAACAAATATGTTAAAAATAGAGAAATTATAA
Upstream 100 bases:
>100_bases AAAACTAAATTAATATTATAGAATTTAGTTAATTTTATTATTAGGCTTTAATATTACATAAATATAAAAAGGCATTAAAA TTTATAGGAGAGGTGTTTAT
Downstream 100 bases:
>100_bases TATTTATTTTTAAATTTAAAATACTTTAAAACTAAAATAAGCTGTTTCAACATACAATATCCCTTGTATTTGAAACAGCT TATTTTAATCTATGTATTAA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MQKTKMIFTIGPASDNEEIIRKFIGIGMNAARLNFSHGTYESHREKIELIKKVREDMGTPTAIVLDIKGPKIRTHNFVND GVELKTGQEFCFVCGDELLGDEERCSITYEELYKDIQVGGEILVDDGLLRFKVIAVEGKSIRCAVTVGGMIKNHKGVNVP NVIIRLPSVTEKDIADIKFGCEMGVDFIAASFIRKASDVADVKKILSENNGKHIKVIAKIENQEGVDNIDSIIEQTDAVM VARGDMGVEIPIQKVPIIQKMIIRKCNDSGKFVVTATQMLDSMIRNSLPTRAEASDICNAIFDGTDAIMLSGESASGNFP IEAATTMSEIAQEAEAHLDYAHLTARLREPSLTDYSGAISYTACRTSNLLNAAAIVAATKSGATATMISRYRPKSPVIAI TPYEQVRRSLALTFGVLPMLCEMYNTTDEILVEARRSVFELNFALPGDDIVVAAGMPTTQTGGTNMLKIEKL
Sequences:
>Translated_472_residues MQKTKMIFTIGPASDNEEIIRKFIGIGMNAARLNFSHGTYESHREKIELIKKVREDMGTPTAIVLDIKGPKIRTHNFVND GVELKTGQEFCFVCGDELLGDEERCSITYEELYKDIQVGGEILVDDGLLRFKVIAVEGKSIRCAVTVGGMIKNHKGVNVP NVIIRLPSVTEKDIADIKFGCEMGVDFIAASFIRKASDVADVKKILSENNGKHIKVIAKIENQEGVDNIDSIIEQTDAVM VARGDMGVEIPIQKVPIIQKMIIRKCNDSGKFVVTATQMLDSMIRNSLPTRAEASDICNAIFDGTDAIMLSGESASGNFP IEAATTMSEIAQEAEAHLDYAHLTARLREPSLTDYSGAISYTACRTSNLLNAAAIVAATKSGATATMISRYRPKSPVIAI TPYEQVRRSLALTFGVLPMLCEMYNTTDEILVEARRSVFELNFALPGDDIVVAAGMPTTQTGGTNMLKIEKL >Mature_472_residues MQKTKMIFTIGPASDNEEIIRKFIGIGMNAARLNFSHGTYESHREKIELIKKVREDMGTPTAIVLDIKGPKIRTHNFVND GVELKTGQEFCFVCGDELLGDEERCSITYEELYKDIQVGGEILVDDGLLRFKVIAVEGKSIRCAVTVGGMIKNHKGVNVP NVIIRLPSVTEKDIADIKFGCEMGVDFIAASFIRKASDVADVKKILSENNGKHIKVIAKIENQEGVDNIDSIIEQTDAVM VARGDMGVEIPIQKVPIIQKMIIRKCNDSGKFVVTATQMLDSMIRNSLPTRAEASDICNAIFDGTDAIMLSGESASGNFP IEAATTMSEIAQEAEAHLDYAHLTARLREPSLTDYSGAISYTACRTSNLLNAAAIVAATKSGATATMISRYRPKSPVIAI TPYEQVRRSLALTFGVLPMLCEMYNTTDEILVEARRSVFELNFALPGDDIVVAAGMPTTQTGGTNMLKIEKL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=489, Percent_Identity=42.7402862985685, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI33286422, Length=489, Percent_Identity=42.5357873210634, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI33286420, Length=489, Percent_Identity=42.5357873210634, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI10835121, Length=495, Percent_Identity=41.010101010101, Blast_Score=339, Evalue=4e-93, Organism=Homo sapiens, GI32967597, Length=495, Percent_Identity=41.010101010101, Blast_Score=338, Evalue=5e-93, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=45.4861111111111, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=45.4861111111111, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=44.0677966101695, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=44.0677966101695, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI310128738, Length=211, Percent_Identity=44.5497630331754, Blast_Score=160, Evalue=2e-39, Organism=Escherichia coli, GI1787965, Length=477, Percent_Identity=43.8155136268344, Blast_Score=397, Evalue=1e-112, Organism=Escherichia coli, GI1788160, Length=477, Percent_Identity=36.2683438155136, Blast_Score=287, Evalue=1e-78, Organism=Caenorhabditis elegans, GI17544584, Length=484, Percent_Identity=42.7685950413223, Blast_Score=352, Evalue=3e-97, Organism=Caenorhabditis elegans, GI71984413, Length=484, Percent_Identity=40.2892561983471, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17506829, Length=484, Percent_Identity=40.2892561983471, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI71984406, Length=484, Percent_Identity=40.2892561983471, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17506831, Length=484, Percent_Identity=40.2892561983471, Blast_Score=300, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6319279, Length=455, Percent_Identity=41.5384615384615, Blast_Score=318, Evalue=8e-88, Organism=Saccharomyces cerevisiae, GI6324923, Length=482, Percent_Identity=39.8340248962656, Blast_Score=309, Evalue=6e-85, Organism=Drosophila melanogaster, GI24648964, Length=482, Percent_Identity=41.2863070539419, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI28571814, Length=482, Percent_Identity=41.2863070539419, Blast_Score=342, Evalue=5e-94, Organism=Drosophila melanogaster, GI24648966, Length=410, Percent_Identity=41.9512195121951, Blast_Score=305, Evalue=4e-83, Organism=Drosophila melanogaster, GI24581235, Length=433, Percent_Identity=36.4896073903002, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI24646914, Length=289, Percent_Identity=38.4083044982699, Blast_Score=194, Evalue=8e-50,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51565; Mature: 51565
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTKMIFTIGPASDNEEIIRKFIGIGMNAARLNFSHGTYESHREKIELIKKVREDMGTP CCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCC TAIVLDIKGPKIRTHNFVNDGVELKTGQEFCFVCGDELLGDEERCSITYEELYKDIQVGG EEEEEECCCCEEEECCCCCCCEEEECCCCEEEEECHHHCCCCHHCEEEHHHHHHHHHCCC EILVDDGLLRFKVIAVEGKSIRCAVTVGGMIKNHKGVNVPNVIIRLPSVTEKDIADIKFG EEEEECCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH CEMGVDFIAASFIRKASDVADVKKILSENNGKHIKVIAKIENQEGVDNIDSIIEQTDAVM HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHCCEEE VARGDMGVEIPIQKVPIIQKMIIRKCNDSGKFVVTATQMLDSMIRNSLPTRAEASDICNA EEECCCCEECCHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHH IFDGTDAIMLSGESASGNFPIEAATTMSEIAQEAEAHLDYAHLTARLREPSLTDYSGAIS HHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEE YTACRTSNLLNAAAIVAATKSGATATMISRYRPKSPVIAITPYEQVRRSLALTFGVLPML EEEHHCCCCHHHEEEEEECCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHH CEMYNTTDEILVEARRSVFELNFALPGDDIVVAAGMPTTQTGGTNMLKIEKL HHHHCCHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECC >Mature Secondary Structure MQKTKMIFTIGPASDNEEIIRKFIGIGMNAARLNFSHGTYESHREKIELIKKVREDMGTP CCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCC TAIVLDIKGPKIRTHNFVNDGVELKTGQEFCFVCGDELLGDEERCSITYEELYKDIQVGG EEEEEECCCCEEEECCCCCCCEEEECCCCEEEEECHHHCCCCHHCEEEHHHHHHHHHCCC EILVDDGLLRFKVIAVEGKSIRCAVTVGGMIKNHKGVNVPNVIIRLPSVTEKDIADIKFG EEEEECCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH CEMGVDFIAASFIRKASDVADVKKILSENNGKHIKVIAKIENQEGVDNIDSIIEQTDAVM HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHCCEEE VARGDMGVEIPIQKVPIIQKMIIRKCNDSGKFVVTATQMLDSMIRNSLPTRAEASDICNA EEECCCCEECCHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHH IFDGTDAIMLSGESASGNFPIEAATTMSEIAQEAEAHLDYAHLTARLREPSLTDYSGAIS HHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEE YTACRTSNLLNAAAIVAATKSGATATMISRYRPKSPVIAITPYEQVRRSLALTFGVLPML EEEHHCCCCHHHEEEEEECCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHH CEMYNTTDEILVEARRSVFELNFALPGDDIVVAAGMPTTQTGGTNMLKIEKL HHHHCCHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11792842; 7559358 [H]