| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is 187918669
Identifier: 187918669
GI number: 187918669
Start: 876320
End: 877273
Strand: Direct
Name: 187918669
Synonym: BH0816
Alternate gene names: NA
Gene position: 876320-877273 (Clockwise)
Preceding gene: 187918668
Following gene: 187918670
Centisome position: 95.01
GC content: 28.2
Gene sequence:
>954_bases TTGGTGTATATGATTTTAAAGGATTTATTTAATAAGTTCACATTTAAGAATGCCTTAGGTGCAGTAAAAGATATTTCAAT TGCTATGAAACATAAGTTTGTAAAGATTAAGGTTTATTCTTTAGTAGGTGTTGCTGGTACTGGAAAAAGTTTTAGATCTC ATTTAATAGCAGATAAATATTCTATTCCTTTGATCATTGATGATGGTGTTTTAATAAAAAATATGAAGATTATTGCTGGG AGTTCTGCTAAGTTTGAGAATAATGTGTTTGATGCAATAAGGCGTTCTATTTTTGAAGATGATGCGCATAGAAATGAAAT TGTTGAAGCTCTTCGCAAAGAAAATTTTAATAAAATATTGATATTGGGAACAAGTATTCGCATGATAGATAAAATAACAG CTCGACTTTTATTGCCTAGTTCTTCCAAAATTATTTATATAACAGATATTTCTACTAAAAAGGAAATAGAGAAAGCAAGA ATTTCAAGAGAGATGGGCGAACATGTTGTTCCAGCAGCTGCCTTTGAGATAACATCTATTAAGCCAAGTTTATTATTAGA TTCGATTCGAGTTTTTTTTAAAAGCAAAGGGTTTTTATCAAAAAAACGGAACTATATTCGTTCTATTGTAAAGCCTCATT TTCATGAAGAGGGGGGAATTTTATCTGTTTCTAAAAATGCTGTAAGACAAATTATTGAACATTGTGTTTCTGAATATAAT AGAGATTATATTGTCTATGATTTGAAAATTAAAAAGAGTCAGGGCAGTTATTATTTTAAGCTCTTTTTAGATATTCCACT TAAGAATGATTTACTTAATGGTGCGGAAATGCTTAGGAATTATATTATTGAAAACGTACTAAAATATACGGTAATTAATA TATCTGGTATTGATGTTATCATACATAGATTTTATGATCAAAAATGTAATTTGGAAAAAAAAGATGAATGTTGA
Upstream 100 bases:
>100_bases TTACATTCTTTTTTGATAAAATTTAACCAGTCTTTATTTTTAAGAAATGAATTTTTTGTTGAACCTAGTTCAGATTTTTT AAAACAGATAAGTAATATTT
Downstream 100 bases:
>100_bases CTTGGATAATATAAGTAATGTCTTTTTGGTAGGCATTAAGGGCTCTGGACTTTGTTCACTTGCGTGTTTTTTAAATGATA AGGGGTATTTTGTAGAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MVYMILKDLFNKFTFKNALGAVKDISIAMKHKFVKIKVYSLVGVAGTGKSFRSHLIADKYSIPLIIDDGVLIKNMKIIAG SSAKFENNVFDAIRRSIFEDDAHRNEIVEALRKENFNKILILGTSIRMIDKITARLLLPSSSKIIYITDISTKKEIEKAR ISREMGEHVVPAAAFEITSIKPSLLLDSIRVFFKSKGFLSKKRNYIRSIVKPHFHEEGGILSVSKNAVRQIIEHCVSEYN RDYIVYDLKIKKSQGSYYFKLFLDIPLKNDLLNGAEMLRNYIIENVLKYTVINISGIDVIIHRFYDQKCNLEKKDEC
Sequences:
>Translated_317_residues MVYMILKDLFNKFTFKNALGAVKDISIAMKHKFVKIKVYSLVGVAGTGKSFRSHLIADKYSIPLIIDDGVLIKNMKIIAG SSAKFENNVFDAIRRSIFEDDAHRNEIVEALRKENFNKILILGTSIRMIDKITARLLLPSSSKIIYITDISTKKEIEKAR ISREMGEHVVPAAAFEITSIKPSLLLDSIRVFFKSKGFLSKKRNYIRSIVKPHFHEEGGILSVSKNAVRQIIEHCVSEYN RDYIVYDLKIKKSQGSYYFKLFLDIPLKNDLLNGAEMLRNYIIENVLKYTVINISGIDVIIHRFYDQKCNLEKKDEC >Mature_317_residues MVYMILKDLFNKFTFKNALGAVKDISIAMKHKFVKIKVYSLVGVAGTGKSFRSHLIADKYSIPLIIDDGVLIKNMKIIAG SSAKFENNVFDAIRRSIFEDDAHRNEIVEALRKENFNKILILGTSIRMIDKITARLLLPSSSKIIYITDISTKKEIEKAR ISREMGEHVVPAAAFEITSIKPSLLLDSIRVFFKSKGFLSKKRNYIRSIVKPHFHEEGGILSVSKNAVRQIIEHCVSEYN RDYIVYDLKIKKSQGSYYFKLFLDIPLKNDLLNGAEMLRNYIIENVLKYTVINISGIDVIIHRFYDQKCNLEKKDEC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36366; Mature: 36366
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYMILKDLFNKFTFKNALGAVKDISIAMKHKFVKIKVYSLVGVAGTGKSFRSHLIADKY CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHCCC SIPLIIDDGVLIKNMKIIAGSSAKFENNVFDAIRRSIFEDDAHRNEIVEALRKENFNKIL CCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE ILGTSIRMIDKITARLLLPSSSKIIYITDISTKKEIEKARISREMGEHVVPAAAFEITSI EEECCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHEEEECC KPSLLLDSIRVFFKSKGFLSKKRNYIRSIVKPHFHEEGGILSVSKNAVRQIIEHCVSEYN CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHC RDYIVYDLKIKKSQGSYYFKLFLDIPLKNDLLNGAEMLRNYIIENVLKYTVINISGIDVI CCEEEEEEEEEECCCCEEEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHEEEECHHHHH IHRFYDQKCNLEKKDEC HHHHHHHCCCCCCCCCC >Mature Secondary Structure MVYMILKDLFNKFTFKNALGAVKDISIAMKHKFVKIKVYSLVGVAGTGKSFRSHLIADKY CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHCCC SIPLIIDDGVLIKNMKIIAGSSAKFENNVFDAIRRSIFEDDAHRNEIVEALRKENFNKIL CCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE ILGTSIRMIDKITARLLLPSSSKIIYITDISTKKEIEKARISREMGEHVVPAAAFEITSI EEECCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHEEEECC KPSLLLDSIRVFFKSKGFLSKKRNYIRSIVKPHFHEEGGILSVSKNAVRQIIEHCVSEYN CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHC RDYIVYDLKIKKSQGSYYFKLFLDIPLKNDLLNGAEMLRNYIIENVLKYTVINISGIDVI CCEEEEEEEEEECCCCEEEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHEEEECHHHHH IHRFYDQKCNLEKKDEC HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA