| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918636
Identifier: 187918636
GI number: 187918636
Start: 832797
End: 833981
Strand: Direct
Name: 187918636
Synonym: BH0783
Alternate gene names: NA
Gene position: 832797-833981 (Clockwise)
Preceding gene: 187918635
Following gene: 187918637
Centisome position: 90.29
GC content: 26.84
Gene sequence:
>1185_bases TTGAGAAAAGAGTTATTTTTTTTAGTTTTAATCATTTTAATAGTTTGTGGTATTGTAATTTTTTTTGTTGATAGTTCTAA AAGAGAGCAGATATATTTTGAATTAAATACTAAGAGTAATATTAGCTTTTTATTTCTTATAGAAGATGAGAGTGACAATC TTTTAAGTATGCAAGAGATTTTTATTAATATAAAAACAGGAAGTGTTGGCTTTTTAGATATTCCTGTTTATACAGGTTAT GAGGATTTAAAGGGAAATGTTTCTTGGTTTGAAGACTTATATAAAAAGAATAGATTTGTTGAATTTTTATCTAAAGTATC CCGGCAGTTAAATCATGAACCTGATTATTATATTCGTTTTAAAAAGAATAATTTTGTGAAATTTATTGACTATCTTGGTG GAGTGCGACTTCTTGTTAAAAACCCTGTTAAAATATATAGTTTAGTACGTTCTATCTTAATACCTTCTGGTAATTCTGTT TTTGATGGAGATAAGTCTTATGATTATTTGAGTTATTTCAGAGATGTTGCTTCTTACGATGAAAGATCTGAGTTTTTTAA GGAATTTTTTAAAAAAATTTTAACACAATTTTCTGATTTTAAAGAGGAGTATGATTATTTCTCTAAAATGTATTTCATGT TAGAGACTAATCTTTCTGAAACCGTATTTAAGTATATTCTTACTAATTATAAAATAAATAATGAGAGGCTTATTTTTATT AATATTAAGGGGCAAGAGGAGACATTTAAGGATAATGATGATAATTTAATAAAAGTTATTTTTCCTTATTATGGGGGAGC GGTTCTTAAAGAGTCGATAGAAAATTTAAATAGAGATTTAATGGGTGAAACTAGAAATGAAGAGGCAATTAGAGTTGTTG TTTTAAATGGTACTAAGACTGCTGGACTTGCAAAGAATGTAGCAGATATTTTTAAATCTTTTAAATTTAAGGTTGTAAGG TTTGGTAATGCAGATAGGCATAATTATTCTCATACTTTAATAATAAATAATTCAGATAATTTGGAGATTGCCATTAAGGT TGGAGATGTAATTAGATCAAGAACTATTAAACCAATTTCTGAGTTTCGTGTAGATACTTTGGGACTTGATATGCCTGATA TGAGTCCTGATGTAATAATCATTTTGGGAGATGATTTTGATGGGAGATATGTTAAAAATAGATGA
Upstream 100 bases:
>100_bases TAGGCATAGGATTGAGCAAGGATTACCTGTCGATTATTTGCTTCCCTTTGATGTTTTGCGATATATTAAAAATAATAATT TATATGTTAAAGGTAAATAA
Downstream 100 bases:
>100_bases TATTAAGAAGCTATGCAAGATTATATCTGATTTTGGTGGAATTGATGTTTTAAGTATTGATGTTAGTTCTGTTTGTAATT GGGCTGATTTTTTTATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MRKELFFLVLIILIVCGIVIFFVDSSKREQIYFELNTKSNISFLFLIEDESDNLLSMQEIFINIKTGSVGFLDIPVYTGY EDLKGNVSWFEDLYKKNRFVEFLSKVSRQLNHEPDYYIRFKKNNFVKFIDYLGGVRLLVKNPVKIYSLVRSILIPSGNSV FDGDKSYDYLSYFRDVASYDERSEFFKEFFKKILTQFSDFKEEYDYFSKMYFMLETNLSETVFKYILTNYKINNERLIFI NIKGQEETFKDNDDNLIKVIFPYYGGAVLKESIENLNRDLMGETRNEEAIRVVVLNGTKTAGLAKNVADIFKSFKFKVVR FGNADRHNYSHTLIINNSDNLEIAIKVGDVIRSRTIKPISEFRVDTLGLDMPDMSPDVIIILGDDFDGRYVKNR
Sequences:
>Translated_394_residues MRKELFFLVLIILIVCGIVIFFVDSSKREQIYFELNTKSNISFLFLIEDESDNLLSMQEIFINIKTGSVGFLDIPVYTGY EDLKGNVSWFEDLYKKNRFVEFLSKVSRQLNHEPDYYIRFKKNNFVKFIDYLGGVRLLVKNPVKIYSLVRSILIPSGNSV FDGDKSYDYLSYFRDVASYDERSEFFKEFFKKILTQFSDFKEEYDYFSKMYFMLETNLSETVFKYILTNYKINNERLIFI NIKGQEETFKDNDDNLIKVIFPYYGGAVLKESIENLNRDLMGETRNEEAIRVVVLNGTKTAGLAKNVADIFKSFKFKVVR FGNADRHNYSHTLIINNSDNLEIAIKVGDVIRSRTIKPISEFRVDTLGLDMPDMSPDVIIILGDDFDGRYVKNR >Mature_394_residues MRKELFFLVLIILIVCGIVIFFVDSSKREQIYFELNTKSNISFLFLIEDESDNLLSMQEIFINIKTGSVGFLDIPVYTGY EDLKGNVSWFEDLYKKNRFVEFLSKVSRQLNHEPDYYIRFKKNNFVKFIDYLGGVRLLVKNPVKIYSLVRSILIPSGNSV FDGDKSYDYLSYFRDVASYDERSEFFKEFFKKILTQFSDFKEEYDYFSKMYFMLETNLSETVFKYILTNYKINNERLIFI NIKGQEETFKDNDDNLIKVIFPYYGGAVLKESIENLNRDLMGETRNEEAIRVVVLNGTKTAGLAKNVADIFKSFKFKVVR FGNADRHNYSHTLIINNSDNLEIAIKVGDVIRSRTIKPISEFRVDTLGLDMPDMSPDVIIILGDDFDGRYVKNR
Specific function: Unknown
COG id: COG1316
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46146; Mature: 46146
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKELFFLVLIILIVCGIVIFFVDSSKREQIYFELNTKSNISFLFLIEDESDNLLSMQEI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEE FINIKTGSVGFLDIPVYTGYEDLKGNVSWFEDLYKKNRFVEFLSKVSRQLNHEPDYYIRF EEEEECCCEEEEEECEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE KKNNFVKFIDYLGGVRLLVKNPVKIYSLVRSILIPSGNSVFDGDKSYDYLSYFRDVASYD ECCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC ERSEFFKEFFKKILTQFSDFKEEYDYFSKMYFMLETNLSETVFKYILTNYKINNERLIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCEEECCCEEEEE NIKGQEETFKDNDDNLIKVIFPYYGGAVLKESIENLNRDLMGETRNEEAIRVVVLNGTKT EECCCCCCCCCCCCCEEEEEECHHCCHHHHHHHHHHCHHHCCCCCCCCEEEEEEEECCCC AGLAKNVADIFKSFKFKVVRFGNADRHNYSHTLIINNSDNLEIAIKVGDVIRSRTIKPIS CHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECHHHHHCCCCCHH EFRVDTLGLDMPDMSPDVIIILGDDFDGRYVKNR HHCHHHCCCCCCCCCCCEEEEECCCCCCCEECCC >Mature Secondary Structure MRKELFFLVLIILIVCGIVIFFVDSSKREQIYFELNTKSNISFLFLIEDESDNLLSMQEI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEE FINIKTGSVGFLDIPVYTGYEDLKGNVSWFEDLYKKNRFVEFLSKVSRQLNHEPDYYIRF EEEEECCCEEEEEECEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE KKNNFVKFIDYLGGVRLLVKNPVKIYSLVRSILIPSGNSVFDGDKSYDYLSYFRDVASYD ECCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC ERSEFFKEFFKKILTQFSDFKEEYDYFSKMYFMLETNLSETVFKYILTNYKINNERLIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCEEECCCEEEEE NIKGQEETFKDNDDNLIKVIFPYYGGAVLKESIENLNRDLMGETRNEEAIRVVVLNGTKT EECCCCCCCCCCCCCEEEEEECHHCCHHHHHHHHHHCHHHCCCCCCCCEEEEEEEECCCC AGLAKNVADIFKSFKFKVVRFGNADRHNYSHTLIINNSDNLEIAIKVGDVIRSRTIKPIS CHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECHHHHHCCCCCHH EFRVDTLGLDMPDMSPDVIIILGDDFDGRYVKNR HHCHHHCCCCCCCCCCCEEEEECCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA