Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is ybeB [C]

Identifier: 187918637

GI number: 187918637

Start: 833947

End: 834306

Strand: Direct

Name: ybeB [C]

Synonym: BH0784

Alternate gene names: 187918637

Gene position: 833947-834306 (Clockwise)

Preceding gene: 187918636

Following gene: 187918638

Centisome position: 90.42

GC content: 29.44

Gene sequence:

>360_bases
ATGATTTTGATGGGAGATATGTTAAAAATAGATGATATTAAGAAGCTATGCAAGATTATATCTGATTTTGGTGGAATTGA
TGTTTTAAGTATTGATGTTAGTTCTGTTTGTAATTGGGCTGATTTTTTTATTATTGTTTCATGTTCATCATTTAAGCAAA
TGGAAGCTTTGCATGCTGAAAGATTAGTGACATTCTTTAAAGAAAGGGATTTTAATTATTGTATTCAAGGTAAGGGATTT
ATTTATGATTGGACAATTATTTCATGTGAAGGTTTAGTTATACATTTGATGAGTGAAAAGGCCAGAGAATACTATGAGCT
TGAAAAGATATGGGATAGGGGAGAAGTTATTTATCCTTGA

Upstream 100 bases:

>100_bases
ATTAGATCAAGAACTATTAAACCAATTTCTGAGTTTCGTGTAGATACTTTGGGACTTGATATGCCTGATATGAGTCCTGA
TGTAATAATCATTTTGGGAG

Downstream 100 bases:

>100_bases
GAGTTATTTAATTAAAAAAAATAAAAATATCGCAAGAATTATTTACAAAAAATTAAAAATATTCTAGATTTAAAATATGT
ATTTTAGGGAGGCCTAGGAG

Product: iojap protein family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MILMGDMLKIDDIKKLCKIISDFGGIDVLSIDVSSVCNWADFFIIVSCSSFKQMEALHAERLVTFFKERDFNYCIQGKGF
IYDWTIISCEGLVIHLMSEKAREYYELEKIWDRGEVIYP

Sequences:

>Translated_119_residues
MILMGDMLKIDDIKKLCKIISDFGGIDVLSIDVSSVCNWADFFIIVSCSSFKQMEALHAERLVTFFKERDFNYCIQGKGF
IYDWTIISCEGLVIHLMSEKAREYYELEKIWDRGEVIYP
>Mature_119_residues
MILMGDMLKIDDIKKLCKIISDFGGIDVLSIDVSSVCNWADFFIIVSCSSFKQMEALHAERLVTFFKERDFNYCIQGKGF
IYDWTIISCEGLVIHLMSEKAREYYELEKIWDRGEVIYP

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13881; Mature: 13881

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILMGDMLKIDDIKKLCKIISDFGGIDVLSIDVSSVCNWADFFIIVSCSSFKQMEALHAE
CEEECCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHCHHHEEEEEECCCHHHHHHHHHH
RLVTFFKERDFNYCIQGKGFIYDWTIISCEGLVIHLMSEKAREYYELEKIWDRGEVIYP
HHHHHHHHCCCCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MILMGDMLKIDDIKKLCKIISDFGGIDVLSIDVSSVCNWADFFIIVSCSSFKQMEALHAE
CEEECCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHCHHHEEEEEECCCHHHHHHHHHH
RLVTFFKERDFNYCIQGKGFIYDWTIISCEGLVIHLMSEKAREYYELEKIWDRGEVIYP
HHHHHHHHCCCCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA