| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918072
Identifier: 187918072
GI number: 187918072
Start: 196449
End: 198692
Strand: Direct
Name: 187918072
Synonym: BH0199
Alternate gene names: NA
Gene position: 196449-198692 (Clockwise)
Preceding gene: 187918071
Following gene: 187918075
Centisome position: 21.3
GC content: 23.35
Gene sequence:
>2244_bases ATGATAATTAAGATATTACTCTTAATCTTAATACACGCATTAATTCCACATAAAATAATAAAAGCTGACGAGAGAGAACA ATGTAGCAAACAAATAAGAAAACATATTACAAAAATCAATGAATTAAATGGTTCCTTAGAACAAACAAAACGAATAGGCA ACATTTATAATTACATAAAGCAATACTTTCTAGAAAATAATATTCAATACAAAGAACACTCACTTCAAGAAATTGGATTT ATTGGATACTCACAAAAAACAATTCACGCAAAGATAAAAGGCATAGCAAAAACTAATTATAATATTATTATCCCAATCGA AATACAATACAACTTAAAAAATAACCTAGCAATTGCCATTGCAATCACACTAATAGATAACTTCAAGAATAAAAAGCTCA AAAACAGCCTAAACATTTATTTTATAGAAGACGATTCGCATAAACAAATATCAACAATAAGCAGTAGGTTATTATTAAAT AATAATGCTCTCGAGAAAAATACAAATACAATATATTTAATGTTAAATGAAGAGAAAGAAAATAATTTAATAGACTTTAA AAATCAATCAAACATAATAAACTCAAAAACAAATCTAAGCTTTTTAGAAAATTTTATCAAAGCATTTGAAAACAATAAAG TAAACTTTAATGTATCAAAAATAAATGATAAAAATATCAATGAAATATATAACTTGTATTTAAAGGAAGAAATTCCAATT TTAATAATAAGCAACAATAAAGAACAACCATTCTTAACATATGTAAATCATAATAATCTTTGTGGCATTTACAAATCAAT TGAAGAGGCAATCAAAGCTCAAAAAAATATCCAAAACGAAAATGCACTGCACTATATTATTATAAATACTCTATTTAAAA AGTGGATAATAAATGAAAATACACTTATAATAATAATATATGCTATTTACAATTTCACTATCTTAATATTCATCACAAGG TTTAAAAAAACTAGTATTATATTTAGAAAAACGAAAGAAAACTACCATAAAATCATAAAACTATTTTTCATATTATTCCT AAGTACATATATTTCTACTCTACTTACAAATAAAATGCTAAAAGCATATGAAAATTTCATAGACTATAACATTATAAATC CAATATATCTAGTAAATTTTTTTCTAACATTATTTAACTTCAATCTTATATCTTACTTCACATATAACTTTAAAATACAT TTAACCCTTAAAGAACTCAAATATTTAGCAATATCAATCTCCATAATTGAACTTATTATAGTGTTATATATCAAAATAGA ATTTATTTTAACCATAATCTTAAAAAACATATTAATATTCATTATTCCTAATAAAGGAAAAATTTTAAAAAAGATAGTAA TAATGTTTATGTGGATAACAAATCTCATGCTAATAACGTCAATACAAACAACCTTAATGATGTCAAAACCGATCGCACTA AGTTATTTCATATCAATCTCACTCTTCTCAGCAATACTTACCAACATTGTAGAACATTTAAAACACAAAACTGCAACAAT AAGACAAGAACTTAACAAATCTGAAAAGATTGAATCTATCATTCTTTTTTTAATAATTGCCATTACCATAATATCACACG ACATAGAAAAAATTTCAACAATAAAAATAGATCAAATAATAAGCTTTCCAGAAAAAACTAACAAAATTAGCGTAGAATAC CTACAAGACAATAGAAATACAATTGAAATCTCAACAAAAGATTTCAATTTAAACTTAGATAAAAATAAAAAACATGCAAA AAAGGAAATTAAAATACAAAAAGACTTAATAGATTTATCTTTTCAAAAAATAGATGTTGCTGAGAGAACTATCTATGAAG TTAAAATTGCCACGAATAAGATTGCAAAGCAAATTCATCTATTCCTAAAAAATGCATCCGAACTTATCATATATCAAAGC AACACACCATACAAAATAGCATCCAACAATATAATATTTACAGTAAATAATATTAAATCAAATACAATAAACATAACTTT TACGATTAAATCTCAAGAAAAAATTCAATATGATGCTTTTGCTTACTTTCATATTGATGAACACCACGTAAAAATATATG ATCAGAAAACCAAAAAAGAAGTTAAGAATATTAACATAGATTATTCATACGCAATAAAGTATTCCGGAATACTTCCAAAA TCTGCAAAATATGATCAAGATCCCTTTTTTAAACTCCAAAATGATAAGGAAATTGAAAATTTAAAAAATTTTAAGCTAAA TTAG
Upstream 100 bases:
>100_bases ATATCATCAAATGCCAAAAACGTATCAATGATTCTTACTTCCCTTAAAGAAAATCCCAATGTACTCCAAATAATGCAAGT AGAAGAAGATATAAAAAATT
Downstream 100 bases:
>100_bases TTCTCCAGCCGTTTAAAATCAATTCTCTCCTTTCTCTTTGCATAACTTTGAAAAGCTAAACTTACCAAGTTATCAACCAA AGACTCATAATCAAGTCCAT
Product: pili chemotaxis protein CheA-like PilL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MIIKILLLILIHALIPHKIIKADEREQCSKQIRKHITKINELNGSLEQTKRIGNIYNYIKQYFLENNIQYKEHSLQEIGF IGYSQKTIHAKIKGIAKTNYNIIIPIEIQYNLKNNLAIAIAITLIDNFKNKKLKNSLNIYFIEDDSHKQISTISSRLLLN NNALEKNTNTIYLMLNEEKENNLIDFKNQSNIINSKTNLSFLENFIKAFENNKVNFNVSKINDKNINEIYNLYLKEEIPI LIISNNKEQPFLTYVNHNNLCGIYKSIEEAIKAQKNIQNENALHYIIINTLFKKWIINENTLIIIIYAIYNFTILIFITR FKKTSIIFRKTKENYHKIIKLFFILFLSTYISTLLTNKMLKAYENFIDYNIINPIYLVNFFLTLFNFNLISYFTYNFKIH LTLKELKYLAISISIIELIIVLYIKIEFILTIILKNILIFIIPNKGKILKKIVIMFMWITNLMLITSIQTTLMMSKPIAL SYFISISLFSAILTNIVEHLKHKTATIRQELNKSEKIESIILFLIIAITIISHDIEKISTIKIDQIISFPEKTNKISVEY LQDNRNTIEISTKDFNLNLDKNKKHAKKEIKIQKDLIDLSFQKIDVAERTIYEVKIATNKIAKQIHLFLKNASELIIYQS NTPYKIASNNIIFTVNNIKSNTINITFTIKSQEKIQYDAFAYFHIDEHHVKIYDQKTKKEVKNINIDYSYAIKYSGILPK SAKYDQDPFFKLQNDKEIENLKNFKLN
Sequences:
>Translated_747_residues MIIKILLLILIHALIPHKIIKADEREQCSKQIRKHITKINELNGSLEQTKRIGNIYNYIKQYFLENNIQYKEHSLQEIGF IGYSQKTIHAKIKGIAKTNYNIIIPIEIQYNLKNNLAIAIAITLIDNFKNKKLKNSLNIYFIEDDSHKQISTISSRLLLN NNALEKNTNTIYLMLNEEKENNLIDFKNQSNIINSKTNLSFLENFIKAFENNKVNFNVSKINDKNINEIYNLYLKEEIPI LIISNNKEQPFLTYVNHNNLCGIYKSIEEAIKAQKNIQNENALHYIIINTLFKKWIINENTLIIIIYAIYNFTILIFITR FKKTSIIFRKTKENYHKIIKLFFILFLSTYISTLLTNKMLKAYENFIDYNIINPIYLVNFFLTLFNFNLISYFTYNFKIH LTLKELKYLAISISIIELIIVLYIKIEFILTIILKNILIFIIPNKGKILKKIVIMFMWITNLMLITSIQTTLMMSKPIAL SYFISISLFSAILTNIVEHLKHKTATIRQELNKSEKIESIILFLIIAITIISHDIEKISTIKIDQIISFPEKTNKISVEY LQDNRNTIEISTKDFNLNLDKNKKHAKKEIKIQKDLIDLSFQKIDVAERTIYEVKIATNKIAKQIHLFLKNASELIIYQS NTPYKIASNNIIFTVNNIKSNTINITFTIKSQEKIQYDAFAYFHIDEHHVKIYDQKTKKEVKNINIDYSYAIKYSGILPK SAKYDQDPFFKLQNDKEIENLKNFKLN >Mature_747_residues MIIKILLLILIHALIPHKIIKADEREQCSKQIRKHITKINELNGSLEQTKRIGNIYNYIKQYFLENNIQYKEHSLQEIGF IGYSQKTIHAKIKGIAKTNYNIIIPIEIQYNLKNNLAIAIAITLIDNFKNKKLKNSLNIYFIEDDSHKQISTISSRLLLN NNALEKNTNTIYLMLNEEKENNLIDFKNQSNIINSKTNLSFLENFIKAFENNKVNFNVSKINDKNINEIYNLYLKEEIPI LIISNNKEQPFLTYVNHNNLCGIYKSIEEAIKAQKNIQNENALHYIIINTLFKKWIINENTLIIIIYAIYNFTILIFITR FKKTSIIFRKTKENYHKIIKLFFILFLSTYISTLLTNKMLKAYENFIDYNIINPIYLVNFFLTLFNFNLISYFTYNFKIH LTLKELKYLAISISIIELIIVLYIKIEFILTIILKNILIFIIPNKGKILKKIVIMFMWITNLMLITSIQTTLMMSKPIAL SYFISISLFSAILTNIVEHLKHKTATIRQELNKSEKIESIILFLIIAITIISHDIEKISTIKIDQIISFPEKTNKISVEY LQDNRNTIEISTKDFNLNLDKNKKHAKKEIKIQKDLIDLSFQKIDVAERTIYEVKIATNKIAKQIHLFLKNASELIIYQS NTPYKIASNNIIFTVNNIKSNTINITFTIKSQEKIQYDAFAYFHIDEHHVKIYDQKTKKEVKNINIDYSYAIKYSGILPK SAKYDQDPFFKLQNDKEIENLKNFKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87815; Mature: 87815
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKILLLILIHALIPHKIIKADEREQCSKQIRKHITKINELNGSLEQTKRIGNIYNYIK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QYFLENNIQYKEHSLQEIGFIGYSQKTIHAKIKGIAKTNYNIIIPIEIQYNLKNNLAIAI HHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCEEEEE AITLIDNFKNKKLKNSLNIYFIEDDSHKQISTISSRLLLNNNALEKNTNTIYLMLNEEKE EEEEHHCCCCCHHCCCEEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCEEEEEEECCCC NNLIDFKNQSNIINSKTNLSFLENFIKAFENNKVNFNVSKINDKNINEIYNLYLKEEIPI CCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHEECCCCE LIISNNKEQPFLTYVNHNNLCGIYKSIEEAIKAQKNIQNENALHYIIINTLFKKWIINEN EEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCC TLIIIIYAIYNFTILIFITRFKKTSIIFRKTKENYHKIIKLFFILFLSTYISTLLTNKML CEEEEEEHHHHHHEEEHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAYENFIDYNIINPIYLVNFFLTLFNFNLISYFTYNFKIHLTLKELKYLAISISIIELII HHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHH VLYIKIEFILTIILKNILIFIIPNKGKILKKIVIMFMWITNLMLITSIQTTLMMSKPIAL HHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH SYFISISLFSAILTNIVEHLKHKTATIRQELNKSEKIESIILFLIIAITIISHDIEKIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE IKIDQIISFPEKTNKISVEYLQDNRNTIEISTKDFNLNLDKNKKHAKKEIKIQKDLIDLS EEHHHHHCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH FQKIDVAERTIYEVKIATNKIAKQIHLFLKNASELIIYQSNTPYKIASNNIIFTVNNIKS HHHCCHHHHEEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCEEEEEECCCC NTINITFTIKSQEKIQYDAFAYFHIDEHHVKIYDQKTKKEVKNINIDYSYAIKYSGILPK CEEEEEEEECCCCCEEEEEEEEEEEECCEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCC SAKYDQDPFFKLQNDKEIENLKNFKLN CCCCCCCCCEEECCCCHHHHHHCCCCC >Mature Secondary Structure MIIKILLLILIHALIPHKIIKADEREQCSKQIRKHITKINELNGSLEQTKRIGNIYNYIK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QYFLENNIQYKEHSLQEIGFIGYSQKTIHAKIKGIAKTNYNIIIPIEIQYNLKNNLAIAI HHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCEEEEE AITLIDNFKNKKLKNSLNIYFIEDDSHKQISTISSRLLLNNNALEKNTNTIYLMLNEEKE EEEEHHCCCCCHHCCCEEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCEEEEEEECCCC NNLIDFKNQSNIINSKTNLSFLENFIKAFENNKVNFNVSKINDKNINEIYNLYLKEEIPI CCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHEECCCCE LIISNNKEQPFLTYVNHNNLCGIYKSIEEAIKAQKNIQNENALHYIIINTLFKKWIINEN EEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCC TLIIIIYAIYNFTILIFITRFKKTSIIFRKTKENYHKIIKLFFILFLSTYISTLLTNKML CEEEEEEHHHHHHEEEHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAYENFIDYNIINPIYLVNFFLTLFNFNLISYFTYNFKIHLTLKELKYLAISISIIELII HHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHH VLYIKIEFILTIILKNILIFIIPNKGKILKKIVIMFMWITNLMLITSIQTTLMMSKPIAL HHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH SYFISISLFSAILTNIVEHLKHKTATIRQELNKSEKIESIILFLIIAITIISHDIEKIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE IKIDQIISFPEKTNKISVEYLQDNRNTIEISTKDFNLNLDKNKKHAKKEIKIQKDLIDLS EEHHHHHCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH FQKIDVAERTIYEVKIATNKIAKQIHLFLKNASELIIYQSNTPYKIASNNIIFTVNNIKS HHHCCHHHHEEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCEEEEEECCCC NTINITFTIKSQEKIQYDAFAYFHIDEHHVKIYDQKTKKEVKNINIDYSYAIKYSGILPK CEEEEEEEECCCCCEEEEEEEEEEEECCEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCC SAKYDQDPFFKLQNDKEIENLKNFKLN CCCCCCCCCEEECCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA