| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187917894
Identifier: 187917894
GI number: 187917894
Start: 10897
End: 11745
Strand: Direct
Name: 187917894
Synonym: BH0011
Alternate gene names: NA
Gene position: 10897-11745 (Clockwise)
Preceding gene: 187917893
Following gene: 187917895
Centisome position: 1.18
GC content: 30.27
Gene sequence:
>849_bases ATGAGTAAGATATCATATTTTACAAAATACGAAATTGAATGTCCTTTATGCAAATACAAATTTAGGAAAGAAGAACTATT AACAGGAAGCGGCCGACTAATATCTGGAGAGCTAAAAGTTGATTTAAAGAGAGAGTATATAAAAAATGAAAAATATGGCA ATATCTACCCCAGGATATATTCAATAACAGTATGTCCTAATTGTTATCTGGCTGCTTTCCCAAACGAGTTTAATGCAATA GAAGTTGTTAATAATAAAATAAAACAACTTCTAATAGGCAGCACTGATGAACGTAAAGAAATAAAATCAATTTTCAAAGA TAACCTAAACTTTGATGAACCAAGAAGACTTCAGGAAGGAGCTGCTAGTTATATCCTTGCCATAATGTGCTATGAACACC TGGATAAAAACCATAATCCAACTCTAAATCAAGCAAAATGTGCAATAAGATCAGCCTGGGTATTTGAAGATCTAGACAAG GAACACCCAAACCAAAATTATAACTATTTGCAAAAAATATTTTATCATAAAGCAGCATATCTTTATAAACTAACAATTGA AAAAGAGCAAGACAATTCAGAGCCAATTAATGCCGAAACAGTGTTTGGTCCTGATACAGATAAAAATTACGGATACGACA GTGTTTTATACCTATCAAGTCTGCTAGAATATTTTTATGGTAATAAAGAAGATAAACAATACAGATACAATCAACTAGCC GACATAAAAACTCTACTTTCTAAAATAGCCGGAATGGGAAAATCATCAAAAGAAAAACCTTCAATACTTTTGGATAAAAT AAAAGAAGTTTATTTTAAAATCTCAAACGAAATAAAAACTTTCAAATAA
Upstream 100 bases:
>100_bases TATCAAAGTCTTGATTGAACAAATGGATCTAAAATTATATTTGACAATTTCACATGAAAGGGAGTATGCTATTGCATTTG TAATAGTAGAAGATTAATTT
Downstream 100 bases:
>100_bases ATGAAAAAAATACTTGCAGAAATAGCATATGATGGTTCGCTATACTATGGATTTCAAATCCAACCAACAAAACCAACAAT TCAAGGAGAAATTGAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSKISYFTKYEIECPLCKYKFRKEELLTGSGRLISGELKVDLKREYIKNEKYGNIYPRIYSITVCPNCYLAAFPNEFNAI EVVNNKIKQLLIGSTDERKEIKSIFKDNLNFDEPRRLQEGAASYILAIMCYEHLDKNHNPTLNQAKCAIRSAWVFEDLDK EHPNQNYNYLQKIFYHKAAYLYKLTIEKEQDNSEPINAETVFGPDTDKNYGYDSVLYLSSLLEYFYGNKEDKQYRYNQLA DIKTLLSKIAGMGKSSKEKPSILLDKIKEVYFKISNEIKTFK
Sequences:
>Translated_282_residues MSKISYFTKYEIECPLCKYKFRKEELLTGSGRLISGELKVDLKREYIKNEKYGNIYPRIYSITVCPNCYLAAFPNEFNAI EVVNNKIKQLLIGSTDERKEIKSIFKDNLNFDEPRRLQEGAASYILAIMCYEHLDKNHNPTLNQAKCAIRSAWVFEDLDK EHPNQNYNYLQKIFYHKAAYLYKLTIEKEQDNSEPINAETVFGPDTDKNYGYDSVLYLSSLLEYFYGNKEDKQYRYNQLA DIKTLLSKIAGMGKSSKEKPSILLDKIKEVYFKISNEIKTFK >Mature_281_residues SKISYFTKYEIECPLCKYKFRKEELLTGSGRLISGELKVDLKREYIKNEKYGNIYPRIYSITVCPNCYLAAFPNEFNAIE VVNNKIKQLLIGSTDERKEIKSIFKDNLNFDEPRRLQEGAASYILAIMCYEHLDKNHNPTLNQAKCAIRSAWVFEDLDKE HPNQNYNYLQKIFYHKAAYLYKLTIEKEQDNSEPINAETVFGPDTDKNYGYDSVLYLSSLLEYFYGNKEDKQYRYNQLAD IKTLLSKIAGMGKSSKEKPSILLDKIKEVYFKISNEIKTFK
Specific function: Unknown
COG id: COG1655
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018708 [H]
Pfam domain/function: PF09986 DUF2225 [H]
EC number: NA
Molecular weight: Translated: 33045; Mature: 32914
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKISYFTKYEIECPLCKYKFRKEELLTGSGRLISGELKVDLKREYIKNEKYGNIYPRIY CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCEEEHHHHHHHCCCCCCCCCCEEE SITVCPNCYLAAFPNEFNAIEVVNNKIKQLLIGSTDERKEIKSIFKDNLNFDEPRRLQEG EEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHH AASYILAIMCYEHLDKNHNPTLNQAKCAIRSAWVFEDLDKEHPNQNYNYLQKIFYHKAAY HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHE LYKLTIEKEQDNSEPINAETVFGPDTDKNYGYDSVLYLSSLLEYFYGNKEDKQYRYNQLA EEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH DIKTLLSKIAGMGKSSKEKPSILLDKIKEVYFKISNEIKTFK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKISYFTKYEIECPLCKYKFRKEELLTGSGRLISGELKVDLKREYIKNEKYGNIYPRIY CCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCEEEHHHHHHHCCCCCCCCCCEEE SITVCPNCYLAAFPNEFNAIEVVNNKIKQLLIGSTDERKEIKSIFKDNLNFDEPRRLQEG EEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHH AASYILAIMCYEHLDKNHNPTLNQAKCAIRSAWVFEDLDKEHPNQNYNYLQKIFYHKAAY HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHE LYKLTIEKEQDNSEPINAETVFGPDTDKNYGYDSVLYLSSLLEYFYGNKEDKQYRYNQLA EEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH DIKTLLSKIAGMGKSSKEKPSILLDKIKEVYFKISNEIKTFK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]