Click here to switch to the map view.

The map label for this gene is ylcE [H]

Identifier: 187734224

GI number: 187734224

Start: 1351250

End: 1351519

Strand: Direct

Name: ylcE [H]

Synonym: SbBS512_E1481

Alternate gene names: 187734224

Gene position: 1351250-1351519 (Clockwise)

Preceding gene: 187730223

Following gene: 187732559

Centisome position: 29.27

GC content: 47.41

Gene sequence:

>270_bases
ATGCTGCCGCAGCATAGCGATATTGAAATAGCCTGGTATGCTTCGATACAGCAGGAGCCGAATGGCTGGAAGACCGTCAC
CACACAGTTCTACATCCAGGAATTCAGTGAGTATATTGCGCCACTGCAGGATGCTGTAGATCTGGAAATCGCAACGGAGG
AAGAAAGATCGTTGCTGGAGGCATGGAATAAATATCGGGTATTGTTGAATCGTGTTGATACATCAACTGCACCTGATATT
GAGTGGCCTGCAAATCCTGTCAGGGAGTAA

Upstream 100 bases:

>100_bases
ATTTTAGCCCCATCATCTGTGTTTTTTTTCATTGATTTCACCATGTTATAGTTTTATTTGTGAATTAAATCAATTATGGC
GATGAATTACAAGGGGTTAA

Downstream 100 bases:

>100_bases
TCATTGGGATTATGCCGCAGACACGTCGTATGCAGGAACGTGCTGCGGTTAGTTTGTGAGCTTTCGATAGTGGTTGTTAT
TTTTGCCCTTATTTGTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEAWNKYRVLLNRVDTSTAPDI
EWPANPVRE

Sequences:

>Translated_89_residues
MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEAWNKYRVLLNRVDTSTAPDI
EWPANPVRE
>Mature_89_residues
MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEAWNKYRVLLNRVDTSTAPDI
EWPANPVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI1787637, Length=60, Percent_Identity=78.3333333333333, Blast_Score=90, Evalue=3e-20,
Organism=Escherichia coli, GI2367120, Length=60, Percent_Identity=78.3333333333333, Blast_Score=90, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 10411; Mature: 10411

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLE
CCCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHH
AWNKYRVLLNRVDTSTAPDIEWPANPVRE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLE
CCCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHH
AWNKYRVLLNRVDTSTAPDIEWPANPVRE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]