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The map label for this gene is tfaQ [H]

Identifier: 187730223

GI number: 187730223

Start: 1349886

End: 1350470

Strand: Direct

Name: tfaQ [H]

Synonym: SbBS512_E1479

Alternate gene names: 187730223

Gene position: 1349886-1350470 (Clockwise)

Preceding gene: 187732421

Following gene: 187734224

Centisome position: 29.24

GC content: 47.69

Gene sequence:

>585_bases
ATGGCATTCAGAATGAGTGAACAAGCACGGACCATAAAAATTTATAATCTGCTGGCCGGAACTAATGAATTTATTGGTGA
AGGTGACGCATATATTCCGCCTCATACAGGTCTGCCAGCAAATAGTACCGATATTGCACCACCAGATATTCCTGCTGGCT
TTGTGGCTGTTTTCAACAGTGATGAGGCATCGTGGCATCTCGTTGAAGACCATCGGGGTAAAACGGTTTATGACGTAGCG
TCAGGGGACGAGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCA
GAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAAATGTTCCGGATCCGGGAGGCGGAAGAAACAAAAA
ACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGCAGATCTGGAAATTGCAACGGAGGAAGAA
ACCTCATTGCTGGAAGCCTGGAAAAAGTATCGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTG
GCCTACGAACCCTGTCAGGGAGTAA

Upstream 100 bases:

>100_bases
CGATTGGTTCACATGGACACACCATCACCGTTAACGCTGCTGGTAACGCGGAAAACACCGTCAAAAACATCGCATTTAAC
TATATTGTGAGGCTTGCATA

Downstream 100 bases:

>100_bases
TCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACGTGCTGCGGTTGGATGCTATTTTTTCCCTGAAGCGGAAAACA
TTACTACAGTACCTTGAACC

Product: tail fiber assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVA
SGDELFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKMFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEE
TSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE

Sequences:

>Translated_194_residues
MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVA
SGDELFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKMFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEE
TSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
>Mature_193_residues
AFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDEASWHLVEDHRGKTVYDVAS
GDELFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKMFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEET
SLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI2367120, Length=191, Percent_Identity=95.8115183246073, Blast_Score=375, Evalue=1e-106,
Organism=Escherichia coli, GI1787637, Length=191, Percent_Identity=95.2879581151832, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1787402, Length=190, Percent_Identity=34.7368421052632, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 21744; Mature: 21613

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS
CCCCCCCCCCEEEEEEEHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
DEASWHLVEDHRGKTVYDVASGDELFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEA
CCCEEEEEECCCCCEEEEECCCCEEEHHHCCCCCCCCEEECCCCCCEECCCEEEEECCCH
EKMFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEETSLLEAWKKYRVLLNRVDTS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCC
TAPDIEWPTNPVRE
CCCCCCCCCCCCCC
>Mature Secondary Structure 
AFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS
CCCCCCCCCEEEEEEEHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
DEASWHLVEDHRGKTVYDVASGDELFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEA
CCCEEEEEECCCCCEEEEECCCCEEEHHHCCCCCCCCEEECCCCCCEECCCEEEEECCCH
EKMFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEETSLLEAWKKYRVLLNRVDTS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCC
TAPDIEWPTNPVRE
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]