| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is arsB
Identifier: 187733950
GI number: 187733950
Start: 3544892
End: 3546181
Strand: Reverse
Name: arsB
Synonym: SbBS512_E3819
Alternate gene names: 187733950
Gene position: 3546181-3544892 (Counterclockwise)
Preceding gene: 187732156
Following gene: 187733378
Centisome position: 76.82
GC content: 53.41
Gene sequence:
>1290_bases ATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATTGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAG TGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTGATATTCCGGTGGTGTGGAATATCGTCT GGAACGCGACGGCTGCGTTTATTGCCGTCATTATCATCAGCCTGCTGCTGGATGAGTCCGGCTTTTTTGAATGGGCGGCG CTGCACGTCTCACGCTGGGGTAATGGTCGTGGTCGCTTGCTGTTTACCTGGATTGTCCTGCTCGGTGCTGCCGTTGCCGC CCTGTTTGCCAATGATGGCGCAGCGCTTATTTTGACGCCGATTGTCATCGCCATGCTGCTGGCTTTAGGATTCAGTAAAG GCACGACGCTGGCGTTCGTGATGGCGGCCGGATTCATTGCCGATACCGCCAGCCTGCCGCTTATTGTCTCCAACTTGGTG AATATCGTTTCCGCTGATTTCTTTGGCCTCGGCTTTCGCGAATACGCCTCGGTGATGGTGCCGGTGGATATCGCCGCGAT TGTTGCCACGCTGGTGATGCTACATCTCTATTTTCGCAAAGATATTCCGCAGAACTACGATATGGCGCTGCTGAAATCTC CCGCAGAAGCGATCAAAGATCCTGCTACGTTCAAAACTGGCTGGGTTGTTTTACTGCTTCTGCTGGTGGGATTTTTCGTC CTGGAACCGCTCGGCATTCCGGTGAGCGCCATTGCAGCTGTGGGCGCGCTGATATTATTTGTCGTCGCTAAACGCGGTCA TGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAAATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTT ATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCG ATGCTCGGCACCGGATTCCTCACAGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTC CATTGATGGCAGCACGGCATCTGGCGTTATCAAAGAAGCGATGGTTTATGCCAATGTGATTGGCTGCGATTTGGGACCGA AAATTACCCCAATTGGTAGCCTGGCTACACTACTCTGGCTGCACGTACTTTCACAGAAGAATATGACTATCAGCTGGGGA TATTACTTCCGTACAGGGATTATCATGACCCTGCCTGTGCTGTTTGTGACGCTGGCTGCGCTGGCGCTACGTCTCTCTTT CACTTTGTAA
Upstream 100 bases:
>100_bases GGCTCGACAAAACTGTTCCGCAGACAGTAAGAACATTTACAGTTAAAAAATTTAGCTAAACACATATGTATTTTCGCATG TGTTTTATCCAGGAGGCATT
Downstream 100 bases:
>100_bases TGAGATACTGATATGAGCAACATTACCATTTATCACAACCCGGCCTGCGGCACGTCGCGTAATACGCTGGAGATGATCCG CAACAGCGGCACAGAACCGA
Product: arsenical pump membrane protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAA LHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAA MLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWG YYFRTGIIMTLPVLFVTLAALALRLSFTL
Sequences:
>Translated_429_residues MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAA LHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAA MLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWG YYFRTGIIMTLPVLFVTLAALALRLSFTL >Mature_429_residues MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAA LHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAA MLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWG YYFRTGIIMTLPVLFVTLAALALRLSFTL
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=429, Percent_Identity=99.7668997668998, Blast_Score=828, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 45528; Mature: 45528
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAF CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHH IAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTP HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLGFREYASVMV HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH PVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHH LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAG HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC LTEYLSGVLNVLADNGLWAAMLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCHHHHHHHH MVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWGYYFRTGIIMTLPVLFVTLAA HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHH LALRLSFTL HHHHHHCCC >Mature Secondary Structure MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAF CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHH IAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTP HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLGFREYASVMV HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH PVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHH LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAG HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC LTEYLSGVLNVLADNGLWAAMLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCHHHHHHHH MVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWGYYFRTGIIMTLPVLFVTLAA HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHH LALRLSFTL HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9006011 [H]