| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is arsR
Identifier: 187732156
GI number: 187732156
Start: 3546236
End: 3546589
Strand: Reverse
Name: arsR
Synonym: SbBS512_E3820
Alternate gene names: 187732156
Gene position: 3546589-3546236 (Counterclockwise)
Preceding gene: 187731209
Following gene: 187733950
Centisome position: 76.83
GC content: 49.44
Gene sequence:
>354_bases ATGTCATTTCTGTTACCCATCCAATTGTTCAAAATTCTTGCTGATGAAACCCGTCTGGGCATCGTTTTACTGCTCAGCGA ACTGGGAGAGTTATGCGTCTGCGATCTCTGCACTGCTCTCGACCAGTCGCAGCCCAAGATCTCCCGCCACCTGGCATTGC TGCGTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAATGGGTTCATTACCGCTTATCGCCGCATATTCCAGCATGG GCGGCGAAAATAATTGATGAAGCCTGGCGATGTGAACAGGAAAAGATTCAGGCAATTGTCCGCAACCTGGCTCGACAAAA CTGTTCCGCAGACAGTAAGAACATTTACAGTTAA
Upstream 100 bases:
>100_bases CTATTACCTTCCTCTGCACTTACACATTCGTTAAATCATATATGTTTTTGACTTATCCGCTTCGAAGAGAGACACTACCT GCAACAATCAGGAGCGCAAT
Downstream 100 bases:
>100_bases AAAATTTAGCTAAACACATATGTATTTTCGCATGTGTTTTATCCAGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGT CCTGACCATTGTATTGGTTA
Product: DNA-binding transcriptional repressor ArsR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAW AAKIIDEAWRCEQEKIQAIVRNLARQNCSADSKNIYS
Sequences:
>Translated_117_residues MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAW AAKIIDEAWRCEQEKIQAIVRNLARQNCSADSKNIYS >Mature_116_residues SFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWA AKIIDEAWRCEQEKIQAIVRNLARQNCSADSKNIYS
Specific function: Transcriptional repressor for the arsEFG operon. ArsE is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsE is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789916, Length=117, Percent_Identity=97.4358974358974, Blast_Score=232, Evalue=6e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR018334 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 13341; Mature: 13210
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCE LDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRNLARQNCSADSKNIYS EECCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLL CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCE LDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRNLARQNCSADSKNIYS EECCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721697; 8041620; 9278503 [H]