| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yrbH [C]
Identifier: 187733808
GI number: 187733808
Start: 2854340
End: 2854504
Strand: Direct
Name: yrbH [C]
Synonym: SbBS512_E3052
Alternate gene names: 187733808
Gene position: 2854340-2854504 (Clockwise)
Preceding gene: 187732336
Following gene: 187733261
Centisome position: 61.84
GC content: 43.64
Gene sequence:
>165_bases TTGGAGTCATTACCTTTAGGTTTAGCACCGTCATGCTCGTCTACTGTTGTTCTGGTTGTTGGTGATGCGGTGGCGCTTGC ACTCTCTGAATTGAAAAAATTTACTCGTGCTGATTTCGGCTTATATCATCCAGGAGGTGCACTCGGCATTAAAGCAAATT CATAA
Upstream 100 bases:
>100_bases CTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAA CATAAAACACTATCAGTAAG
Downstream 100 bases:
>100_bases TTTCAAAGTATAAATACAGTAACCGGTCACGCCATCTTTTGGGGTGGCGTTCATTGAAGTGAGTGTCAGCTATGAAAAAT GTTCTGGTCACCGTCCCCAG
Product: phosphosugar isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS
Sequences:
>Translated_54_residues MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS >Mature_54_residues MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS
Specific function: Unknown
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789588, Length=50, Percent_Identity=60, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5473; Mature: 5473
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEECCCCEEEEEECC >Mature Secondary Structure MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA