| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is 187733471
Identifier: 187733471
GI number: 187733471
Start: 1770970
End: 1771437
Strand: Direct
Name: 187733471
Synonym: SbBS512_E1935
Alternate gene names: NA
Gene position: 1770970-1771437 (Clockwise)
Preceding gene: 187734082
Following gene: 187733805
Centisome position: 38.37
GC content: 54.91
Gene sequence:
>468_bases ATGCTGAAAACTGATTCCCTGCGTGAAGCCATGACCCGTTCATGCCGATGGTGTCAGGCTAACCCGGAAAAATTCACCAT TTTCGTGGAGAGCGGCAACATTGAAACGACCGGAGAAACCCCATCGTTTGTTTACCGCTATCAGATGGTGATGTTTGTCA TGGATTACGCCGGGGAGCTGGACGACCTCACGCTGCCGCTGCTGGCGTGGTTATCCGAAAATCAGCCACAGTTGTTGCTC AACCCTGAGCGTAATCAGGACATCAAATTCTCCGCCGTTATCAATGACGATGACAGCGCCGATCTCCTGTTTACGCTCCC CCTGCGGGAACGCGTTCGCATCACGCGCAGCAGTCAGGGCACACCGCAGGCAGAACACCTGCTGGAGCCAAAACCCCGCC TGCCATCTTCCGAAGGCGACTGGTCGCATGTATTCCAGGATGTGACGTGGGGTGAAAGCGATGGATAA
Upstream 100 bases:
>100_bases CGCCTTCTGGATGCACTGGAAACCTGTAACGCGGATAAACGGGCCATTGAATTACTGGAACAGCGCAGGCTGCAACGACT GAACAACGAGGATAACAACC
Downstream 100 bases:
>100_bases GGCATTCACTCGCGTGGATGAAACCTTTGAAGCCATCCGCGACAGCCTGAATCAGCAGGCCATCAATAACATCGCCAGAA AGCTGGCACAGGATTTACGC
Product: P2 phage tail completion protein R (GpR)
Products: NA
Alternate protein names: Phage Tail Completion Protein R; Tail Completion Protein R; Tail Completion Protein; Phage-Related Tail Protein; Bacteriophage Tail Completion Protein R; Tail Completion-Like Protein; Bacteriophage P2 Tail Completion Protein GPR; Phage Tail Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFVYRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLL NPERNQDIKFSAVINDDDSADLLFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG
Sequences:
>Translated_155_residues MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFVYRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLL NPERNQDIKFSAVINDDDSADLLFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG >Mature_155_residues MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFVYRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLL NPERNQDIKFSAVINDDDSADLLFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17771; Mature: 17771
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00172 XYLOSE_ISOMERASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFVYRYQMVMFVMDYAGEL CCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHCCCC DDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADLLFTLPLRERVRITRSSQG CCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCHHEEEECCCCC TPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG CCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFVYRYQMVMFVMDYAGEL CCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHCCCC DDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADLLFTLPLRERVRITRSSQG CCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCHHEEEECCCCC TPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG CCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA