| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187733805
Identifier: 187733805
GI number: 187733805
Start: 1771430
End: 1772065
Strand: Direct
Name: 187733805
Synonym: SbBS512_E1936
Alternate gene names: NA
Gene position: 1771430-1772065 (Clockwise)
Preceding gene: 187733471
Following gene: 187730045
Centisome position: 38.38
GC content: 57.7
Gene sequence:
>636_bases ATGGATAAGGCATTCACTCGCGTGGATGAAACCTTTGAAGCCATCCGCGACAGCCTGAATCAGCAGGCCATCAATAACAT CGCCAGAAAGCTGGCACAGGATTTACGCCGCGCCCAGCAGGCACGTATCCGGTCACAGAAAGCGCCGGACGGGACCGCAT GGACACCACGCAGACGCCACGTAACCCGGATACAGGAGCGCATTCGCTTTATCTGGAATAACGAAGCACGCACGCTGAAA AACTGGCATCACGACACGGGGAAATACGGGCGAACCATCACCGGGTGGGATGAGGATAAAAACAGCATCCGCACGTTTTA CCGGGATGACATCGACCGCTTTCTGGAAATACGCACCCGGCGCATCAACCAGGACAGCACAAAGCGCGTCCCCATGTTCG TAAAACTGCGCACCGCCCGCTACCTGAAAGCCCGTGCAGATGCTTCCGGTGTGACGGTGGGTTACAGCGGCGTGGCCGCA CGTATTGCACGCGTTCATCAGTTCGGTGAGCGCGATCAGGTTGCGCCGGGCATTTTCACCGATTACCCGGTACGTGAGCT GCTGGGTATCAGCCAGGCAGATGAGCGCCCGATTTATAACACGGTGCTGGGCCGGATTGCAGAGGCTGTACGGTGA
Upstream 100 bases:
>100_bases ACACCGCAGGCAGAACACCTGCTGGAGCCAAAACCCCGCCTGCCATCTTCCGAAGGCGACTGGTCGCATGTATTCCAGGA TGTGACGTGGGGTGAAAGCG
Downstream 100 bases:
>100_bases GCGCAGAACTCATGCGGCTACTGAGCAATATCATCCGCACCGGGATCATCTCTGAAGTTGATGAGAAGTCCTGGCGCGTG CGCGTTCGCAGCGGCGAACT
Product: phage virion morphogenesis family
Products: NA
Alternate protein names: Phage Virion Morphogenesis Protein; Phage Tail Completion Protein S; Tail Completion Protein; Phage Virion Morphogenesis Family; Tail Completion-Like Protein; Conserved Protein; Tail Completion Phage Protein; Tail Completion Protein S
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIRSQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLK NWHHDTGKYGRTITGWDEDKNSIRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERPIYNTVLGRIAEAVR
Sequences:
>Translated_211_residues MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIRSQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLK NWHHDTGKYGRTITGWDEDKNSIRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERPIYNTVLGRIAEAVR >Mature_211_residues MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIRSQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLK NWHHDTGKYGRTITGWDEDKNSIRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERPIYNTVLGRIAEAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24626; Mature: 24626
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIRSQKAPDGTAWTPRRRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNSIRTFYRDDIDRFLEIRTR HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAARIARVHQFGERDQVAPGIFT HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCC DYPVRELLGISQADERPIYNTVLGRIAEAVR CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIRSQKAPDGTAWTPRRRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNSIRTFYRDDIDRFLEIRTR HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAARIARVHQFGERDQVAPGIFT HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCC DYPVRELLGISQADERPIYNTVLGRIAEAVR CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA