| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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Identifier: 187733372
GI number: 187733372
Start: 1658862
End: 1659863
Strand: Direct
Name: add
Synonym: SbBS512_E1811
Alternate gene names: 187733372
Gene position: 1658862-1659863 (Clockwise)
Preceding gene: 187730633
Following gene: 187730088
Centisome position: 35.94
GC content: 53.49
Gene sequence:
>1002_bases ATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTCGTCCCCAGACCATTCTTGAACT TGGCCGCCAGTATAATATCTCGCTTCCTGCACAATCCCTGGAAACACTGATTCCCCACGTTCAGGTCATTGCCAACGAAC CCGATCTGGTGAGCTTTCTGACCAAACTTGACTGGGGCGTTAAAGTTCTCGCCTCTCTTGATGCCTGCCGCCGCGTGGCA TTTGAAAACATTGAAGATGCAGCCCGTAACGGCCTGCACTATGTCGAGCTGCGTTTTTCACCAGGCTACATGGCAATGGC ACATAAGCTGCCTGTAGCGGGTGTTGTCGAAGCGGTGATCGATGGCGTACGTGAAGGTTGCCGCACTTTTGGTGTGCAGG CGAAGCTTATCGGCATTATGAGCCGAACCTTCGGCGAAGCCGCCTGTCAGCAAGAGCTGGAGGCCTTTTTAGCCCACCGT GACCAGATTACCGCACTTGATTTAGCCGGTGATGAACTTGGTTTCCCGGGAAGTCTGTTCCTTTCTCACTTCAACCTTGC GCGTGATGCGGGCTGGCATATTACCGTCCATGCAGGCGAAGCTGCCGGGCCGGAAAGCATCTGGCAGGCGATTCGTGAAC TGGGTGCGGAGCGTATTGGACATGGCGTAAAAGCCATTGAAGATCGGGCGCTGATGGATTTTCTCGCCGAGCAACAAATT GGTATTGAATCCTGTCTGACCTCCAATATTCAGACCAGCACCGTAGCAGAGCTGGCTGCACATCCGCTGAAAACGTTCCT TGAGCATGGCATTCGTGCCGGCATTAACACTGACGATCCCGGCGTACAGGGAGTGGATATCATTCACGAATATACCGTTG CCGCGCCAGCTGCTGGGTTATCCCGCGAGCAAATCCGCCAGGCACAGATTAATGGTCTGGAAATGGCTTTCCTCAGCGCT GAGGAAAAACGCGCACTGCGAGAAAAAGTCGCCGCGAAGTAA
Upstream 100 bases:
>100_bases CAATTGCGCAACGTAAAAAATCGTTGCGCAATCGTGGATTTTTACCCTGCTTTGTTTTTATAATGGTGCGCACTTTTATA TCCAGAAAAAGAGTGCGACC
Downstream 100 bases:
>100_bases CAAAATGGATGGTGCAAATTGCACCATCCATTTTTCATGCAAGGCACAAAGTCGCGCGATGTTTGGCGGATTCGATGCCC AGCTCAATCAACTCCATTAC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVA FENIEDAARNGLHYVELRFSPGYMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR DQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQI GIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGINTDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSA EEKRALREKVAAK
Sequences:
>Translated_333_residues MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVA FENIEDAARNGLHYVELRFSPGYMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR DQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQI GIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGINTDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSA EEKRALREKVAAK >Mature_333_residues MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVA FENIEDAARNGLHYVELRFSPGYMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR DQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQI GIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGINTDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSA EEKRALREKVAAK
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=339, Percent_Identity=32.7433628318584, Blast_Score=157, Evalue=1e-38, Organism=Escherichia coli, GI1787910, Length=333, Percent_Identity=98.7987987987988, Blast_Score=671, Evalue=0.0, Organism=Caenorhabditis elegans, GI32565969, Length=339, Percent_Identity=29.7935103244838, Blast_Score=128, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17538512, Length=341, Percent_Identity=30.4985337243402, Blast_Score=128, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6324188, Length=338, Percent_Identity=26.3313609467456, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI24645260, Length=335, Percent_Identity=26.865671641791, Blast_Score=109, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006650 - InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36302; Mature: 36302
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFL CCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH TKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAMAHKLPVAGVVEAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCHHHHHHHHH DGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRDQITALDLAGDELGFPGSLF HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH LSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQI HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC GIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGINTDDPGVQGVDIIHEYTVAAPAAGL CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC SREQIRQAQINGLEMAFLSAEEKRALREKVAAK CHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCCC >Mature Secondary Structure MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFL CCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH TKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAMAHKLPVAGVVEAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCHHHHHHHHH DGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRDQITALDLAGDELGFPGSLF HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH LSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQI HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC GIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGINTDDPGVQGVDIIHEYTVAAPAAGL CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC SREQIRQAQINGLEMAFLSAEEKRALREKVAAK CHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA