| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yjgL [H]
Identifier: 187733276
GI number: 187733276
Start: 4501825
End: 4502505
Strand: Reverse
Name: yjgL [H]
Synonym: SbBS512_E4830
Alternate gene names: 187733276
Gene position: 4502505-4501825 (Counterclockwise)
Preceding gene: 187732665
Following gene: 187730487
Centisome position: 97.54
GC content: 34.65
Gene sequence:
>681_bases TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAATGCTTTTGCCGTTACGCACCACGCCTTCAG TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA GCTGGCAGCATTACCAAAATAGCCGTAAATTACAGGAATTGATTTGGGATAAGTTGGTTGCATATGTCAATGATTTTAAC TTAAGCAATCAAGAAAAATCACGCTTAATACTAAGGTTATTTGATGATGTTAAGTTGCTATTTAATGAAGTGCCTGTCAG CATTTTAGTAAATGATATTTTTTTGAAGGATTTTTTCATGAAGCAACCTGATTTTGCGAAGTGGTACTTCTATCAATTAC TTAAGAAGTATGAGGGCGAACAGCTGTATCTTAATGAGTTAGGATATGTTTATGGTAATGAAGAAAAAACAAATGAAATT GTAAATAACAATCCGGGTTATGTCGTTGAGATTTTTGAAGAAAAGATGGGTAATGAATTAAAAATTAGAACAAGAATGAT GGAAATCCTCCGGGATGGGAAAATAAATATATATGAATATATTAATAAAGAACAGTTAGAAAAATTAAATCCTCCGGAAG ATTTACGTATAGCAATAAAAAAATTGGGGTGGAATAATTGA
Upstream 100 bases:
>100_bases CCATAATGCGTGCACTGGCACGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG GCGGTGTAAGTGAACTGTAG
Downstream 100 bases:
>100_bases ACTATTACTGCATAAAATAATGTGATGCCGGGATGTTTTTGTATTTCCCGGCATCTTTATAGCGATATCAATTATTTACT GAGCGTCGCGACCATCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MPCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQNSRKLQELIWDKLVAYVNDFN LSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEI VNNNPGYVVEIFEEKMGNELKIRTRMMEILRDGKINIYEYINKEQLEKLNPPEDLRIAIKKLGWNN
Sequences:
>Translated_226_residues MPCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQNSRKLQELIWDKLVAYVNDFN LSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEI VNNNPGYVVEIFEEKMGNELKIRTRMMEILRDGKINIYEYINKEQLEKLNPPEDLRIAIKKLGWNN >Mature_225_residues PCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQNSRKLQELIWDKLVAYVNDFNL SNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIV NNNPGYVVEIFEEKMGNELKIRTRMMEILRDGKINIYEYINKEQLEKLNPPEDLRIAIKKLGWNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082399, Length=171, Percent_Identity=56.7251461988304, Blast_Score=194, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26372; Mature: 26241
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQN CCCHHHHHHEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHH SRKLQELIWDKLVAYVNDFNLSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKDFFM HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFEEKMGNEL CCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHCCCCCEEEEEEHHHCCCHH KIRTRMMEILRDGKINIYEYINKEQLEKLNPPEDLRIAIKKLGWNN HHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure PCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQN CCHHHHHHEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHH SRKLQELIWDKLVAYVNDFNLSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKDFFM HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFEEKMGNEL CCCCHHHHHHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHCCCCCEEEEEEHHHCCCHH KIRTRMMEILRDGKINIYEYINKEQLEKLNPPEDLRIAIKKLGWNN HHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]