Click here to switch to the map view.

The map label for this gene is yjgK [H]

Identifier: 187732665

GI number: 187732665

Start: 4504372

End: 4504824

Strand: Reverse

Name: yjgK [H]

Synonym: SbBS512_E4833

Alternate gene names: 187732665

Gene position: 4504824-4504372 (Counterclockwise)

Preceding gene: 187732218

Following gene: 187733276

Centisome position: 97.59

GC content: 50.55

Gene sequence:

>453_bases
ATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAGCATATCAAAGCACA
CGTTACGGCAGAAACGCCAAAGGGCAAGCACGATATCGAAGGCAATCGTCTGTTTTATCTTATCTCGGAAGATATGACCG
AGCCGCACGAAGCTCGCCGTGCGGAGTACCATGCCCGCTATCTCGACATTCAGATTGTGTTAAAAGGTCAGGAAGGCATG
ACCTTCAGTACGCAACCTGCAGGCACCCCGGATACCGACTGGTTAGCTGATAAAGACATCGCATTTTTGCCGGAAGGCGT
TGATGAGAAAACAGTTATCCTTAATGAAGGTGATTTTGTTGTGTTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAG
TGGGCGCGCCAGCCCGGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGA

Upstream 100 bases:

>100_bases
TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATCATCTTTTCGTATAACGATGGAAATGAAACGTTGTT
TTAATTAAGGAGTGGAAAAG

Downstream 100 bases:

>100_bases
TGACTTTTCGCCGTAAATAACTCCAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAA
TTTGTAATGCTTAGACGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPHEARRAEYHARYLDIQIVLKGQEGM
TFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPARVRKAVVKMLMA

Sequences:

>Translated_150_residues
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPHEARRAEYHARYLDIQIVLKGQEGM
TFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPARVRKAVVKMLMA
>Mature_150_residues
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPHEARRAEYHARYLDIQIVLKGQEGM
TFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPARVRKAVVKMLMA

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yhcH/yiaL/yjgK family [H]

Homologues:

Organism=Escherichia coli, GI87082398, Length=150, Percent_Identity=98, Blast_Score=307, Evalue=2e-85,
Organism=Escherichia coli, GI1789615, Length=141, Percent_Identity=29.0780141843972, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1790001, Length=152, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 16898; Mature: 16898

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPHEARR
CEECCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHH
AEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFV
HHHHEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCEE
VFYPGEVHKPLCAVGAPARVRKAVVKMLMA
EECCCCCCCCHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPHEARR
CEECCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHH
AEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFV
HHHHEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCEE
VFYPGEVHKPLCAVGAPARVRKAVVKMLMA
EECCCCCCCCHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 10493123 [H]