| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is norW
Identifier: 187732063
GI number: 187732063
Start: 2957786
End: 2958919
Strand: Reverse
Name: norW
Synonym: SbBS512_E3166
Alternate gene names: 187732063
Gene position: 2958919-2957786 (Counterclockwise)
Preceding gene: 187731615
Following gene: 187731590
Centisome position: 64.1
GC content: 53.35
Gene sequence:
>1134_bases ATGAGTAACGGCATTGTGATCATCGGTTCGGGCTTCGCCGCCCGCCAACTGGTGAAAAATATTCGCAAACAGGACGCCAC TATTCCATTAACCCTGATTGCCGCCGACAGCATGGATGAGTACAACAAACCTGACCTCAGCCATGTTATCAGTCAGGGGC AACGTGCCGATGACCTTACCCGCCAGACGGCGGGTGAATTTGCCGAGCAGTTTAATCTGCACCTGTTTCCACAAACCTGG GTGACGGATATCGATGCCGAAGCCCGTGTGGTGAAAAGCCAGAATAATCAGTGGCAATACGACAAGCTAGTACTGGCAAC CGGTGCCAGTGCCTTTGTCCCGCCTGTGCCTGGGCGTGAGTTAATGCTGACGTTAAATAGTCAGCAAGAGTATCGCGCCT GTGAAACGCAACTGCGGGATGCCCGACGCGTGTTGATTGTTGGCGGTGGTTTGATTGGTAGCGAACTGGCGATGGATTTT TGTCGTGCAGGCAAAGCGGTCACGCTAATCGACAACGCTGCCAGTATTCTGGCGTCGTTAATGCCACCGGAAGTAAGCAG CCGCTTGCAGCATCGGTTGACGGAAATGGGCGTTCATCTGCTGTTGAAATCTCAGTTACAGGGGCTGGAAAAAACGGATT CTGGCATTCTGGCAACGCTGGACCACCAGCGTAGTATCGAAGTGGATGCGGTAATTGCCGCCACCGGACTGCGCCCGGAA ACAGCCCTGGCACGACGCGCCGGGCTGACGATTAATCGCGGCGTTTGCGTCGATAGTTATCTGCAAACCAGTAATGACGA TATTTATGCGCTGGGCGATTACGCGGAAATCAACGGTCAGGTACTGCCATTCCTGCAGCCGATTCAACTTAGCGCGATGG TGCTGGCAAAAAATCTTCTCGGCAATAACACGCCGCTGAAACTACCGACGATGCTGGTGAAAATCAAAACGCCGGAATTA CCGCTGCATCTGGCAGGCGAAACCCAGCGTCAGGATTTACGCTGGCAAATTAATACCGAACGCCAGGGAATGGTGGCTCG CGGTGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAA CATTGCCGATGTAG
Upstream 100 bases:
>100_bases TTGCGCCAGGAACGCCGTGGAGTGAAGTCCCGGATAACTTCCTCTGCCCGGAATGCTCCCTCGGCAAAGACGTCTTTGAA GAACTGGCATCGGAGGCAAA
Downstream 100 bases:
>100_bases GTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTAGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGAT CAGGCGTTTACGCCGCATCC
Product: nitric oxide reductase
Products: NAD; reduced flavorubredoxin; H2O [C]
Alternate protein names: Flavorubredoxin reductase; FlRd-reductase; FlavoRb reductase [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTW VTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDF CRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDHQRSIEVDAVIAATGLRPE TALARRAGLTINRGVCVDSYLQTSNDDIYALGDYAEINGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPTMLVKIKTPEL PLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM
Sequences:
>Translated_377_residues MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTW VTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDF CRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDHQRSIEVDAVIAATGLRPE TALARRAGLTINRGVCVDSYLQTSNDDIYALGDYAEINGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPTMLVKIKTPEL PLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM >Mature_376_residues SNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWV TDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFC RAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDHQRSIEVDAVIAATGLRPET ALARRAGLTINRGVCVDSYLQTSNDDIYALGDYAEINGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPTMLVKIKTPELP LHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM
Specific function: One of at least two accessory proteins for anaerobic nitric oxide (NO) reductase. Reduces the rubredoxin moiety of NO reductase [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI21389617, Length=315, Percent_Identity=21.5873015873016, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI226437568, Length=315, Percent_Identity=21.5873015873016, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI65787454, Length=315, Percent_Identity=21.5873015873016, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI4757732, Length=209, Percent_Identity=26.7942583732057, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI22202629, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1789065, Length=377, Percent_Identity=98.4084880636605, Blast_Score=757, Evalue=0.0, Organism=Escherichia coli, GI1788892, Length=274, Percent_Identity=28.1021897810219, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1789765, Length=323, Percent_Identity=25.3869969040248, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1787352, Length=277, Percent_Identity=28.8808664259928, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17559934, Length=276, Percent_Identity=25.7246376811594, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24639257, Length=373, Percent_Identity=23.0563002680965, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI281359715, Length=373, Percent_Identity=23.0563002680965, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281359713, Length=373, Percent_Identity=23.0563002680965, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24639250, Length=373, Percent_Identity=23.0563002680965, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI18543267, Length=373, Percent_Identity=23.0563002680965, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24639252, Length=373, Percent_Identity=23.0563002680965, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24585130, Length=280, Percent_Identity=22.1428571428571, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 41447; Mature: 41316
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLT CCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHH RQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRE HHHHHHHHHHCCCEECCHHHCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCE LMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASL EEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH MPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDHQRSIEVDAVIAATGLRPE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCH TALARRAGLTINRGVCVDSYLQTSNDDIYALGDYAEINGQVLPFLQPIQLSAMVLAKNLL HHHHHHCCCEEECCCEEHHHHHCCCCCEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHH GNNTPLKLPTMLVKIKTPELPLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVV CCCCCCEECEEEEEEECCCCCEEECCCCCCCCCEEEECCCCCCCEECCCCCHHHHHHHHC SEDRMKEAFGLLKTLPM CHHHHHHHHHHHHHCCC >Mature Secondary Structure SNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLT CCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHH RQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRE HHHHHHHHHHCCCEECCHHHCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCE LMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASL EEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH MPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDHQRSIEVDAVIAATGLRPE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCH TALARRAGLTINRGVCVDSYLQTSNDDIYALGDYAEINGQVLPFLQPIQLSAMVLAKNLL HHHHHHCCCEEECCCEEHHHHHCCCCCEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHH GNNTPLKLPTMLVKIKTPELPLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVV CCCCCCEECEEEEEEECCCCCEEECCCCCCCCCEEEECCCCCCCEECCCCCHHHHHHHHC SEDRMKEAFGLLKTLPM CHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; oxidized flavorubredoxin; O2 [C]
Specific reaction: NADH + oxidized flavorubredoxin + O2 = NAD + reduced flavorubredoxin + H2O [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA