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The map label for this gene is yhfY

Identifier: 187731878

GI number: 187731878

Start: 3485340

End: 3485702

Strand: Reverse

Name: yhfY

Synonym: SbBS512_E3759

Alternate gene names: 187731878

Gene position: 3485702-3485340 (Counterclockwise)

Preceding gene: 187731330

Following gene: 187732423

Centisome position: 75.51

GC content: 51.24

Gene sequence:

>363_bases
ATGGAAACCAGACTCAACCTGCTTTGCGAGGCAGGCGTTATTGATAAGGACATCTGCAAAGGCATGATGCAGGTCGTCAA
CGTACTGGAAACAGAGTGCCATCTGCCGGTGCGCAGTGAGCAAGGAACGATGGCGATGACACATATGGCGAGTGCACTGA
TGCGCAGTCGCCGTGGTGAAGAAATAGAGCCGCTGGATAACGAATTGCTGGCAGAGCTGGCGCAATCCAGCCACTGGCAA
GCCGTTGTGCAATTGCATCAGGTGTTGTTGAAGGAATTCGCACTGGAAGTTAATCCGTGTGAAGAAGGCTATTTGCTGGC
CAACCTTTATGGATTATGGATGGCTGCTAACGAAGAGGTTTGA

Upstream 100 bases:

>100_bases
CTGCTGCGTGCCGTTGTAGATAAACACGCCCTGCTCGCCCATCAACAACGGGTAGTGAGTGGGGAACAGGAACCGAGTTA
TTAAACGAAAGGCATCTGAT

Downstream 100 bases:

>100_bases
AGCTCCCGACAAATCCACGTCGCACAACCTAAATATTCAAAAAAATGAATATTTAATTCAAGGAACAGAAACGAGGCAAC
AAGATGTTTGTAGAAGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQ
AVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV

Sequences:

>Translated_120_residues
METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQ
AVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV
>Mature_120_residues
METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQ
AVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PRD domain

Homologues:

Organism=Escherichia coli, GI87082254, Length=120, Percent_Identity=100, Blast_Score=244, Evalue=8e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFY_ECOLI (P45551)

Other databases:

- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   A65133
- RefSeq:   AP_004408.1
- RefSeq:   NP_417841.2
- ProteinModelPortal:   P45551
- STRING:   P45551
- EnsemblBacteria:   EBESCT00000000853
- EnsemblBacteria:   EBESCT00000018081
- GeneID:   947888
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5696
- KEGG:   eco:b3382
- EchoBASE:   EB2756
- EcoGene:   EG12920
- eggNOG:   NOG09955
- GeneTree:   EBGT00050000011275
- HOGENOM:   HBG417119
- OMA:   NRNPVIK
- ProtClustDB:   CLSK905349
- BioCyc:   EcoCyc:G7734-MONOMER
- Genevestigator:   P45551
- InterPro:   IPR011608
- Gene3D:   G3DSA:1.10.1790.10

Pfam domain/function: PF00874 PRD; SSF63520 PRD

EC number: NA

Molecular weight: Translated: 13528; Mature: 13528

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS51372 PRD_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503