| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yhfZ [H]
Identifier: 187731330
GI number: 187731330
Start: 3485719
End: 3486624
Strand: Reverse
Name: yhfZ [H]
Synonym: SbBS512_E3760
Alternate gene names: 187731330
Gene position: 3486624-3485719 (Counterclockwise)
Preceding gene: 187734261
Following gene: 187731878
Centisome position: 75.53
GC content: 50.11
Gene sequence:
>906_bases ATGCGTCGAACGTTTATCAAAAAAGAAGGCGTCGTCATCACGACGCTGGCCCGTTATTTGTTGGGGGAAAAATGCGGTAA TCGACTGAAAACCATAGATGAGCTGGCAACTGAATGCCGTTCATCGGTTGGCCTGACGCAGGCCGTGTTGAAAACGTTGG AATCAAGTGGAGCGATACGGATTGAACGCCGTGGGCGCAATGGCAGTTATCTGGTCGAAATGGATAATAAAGCGCTGCTG AGTCATGTGGATATCAATAACGTTGTGTGTGCCATGCCTTTGCCCTATACCCGCTTGTACGAAGGTTTAGCAAGCGGGCT GAAAGCCCAGTTTGATGGCATTCCTTTTTATTATGCGCATATGCGTGGCGCGGATATTCGTGTGGAGTGTTTGCTTAACG GTGTCTATGACATGGCAGTAGTTTCCCGCCTGGCGGCGGAAAGTTATCTCAGCCAAAACAATTTGTGCATCGCCCTCGAG CTTGGCCCGCATACGTATGTTGGTGAACATCAACTGATATGCCGCAAAGGTGAGTCTGGAAATGTTAAGCGAGTAGGTCT CGATAGTCGTTCGGCGGATCAGAAAATCATGACCGATGTCTTTTTTGGCGATAGTGATGTGGAACGTGTCGATCTCTCTT ATCACGAGAGTTTACAACGCATTGTTAAAGGCGATGTCGATGCGGTTATCTGGAACGTGGTGGCGGAAAACGAACTGACC ATGCTGGGATTAGAGGCGACGCCGCTCACAGACGATCCGCGATTTTTACAGGCCACCGAAGCCGTGGTCCTGACGCGAGT CGATGATTACCCAATGCAACAACTGCTGCGTGCCGTTGTAGATAAACACGCCCTGCTCGCCCATCAACAACGGGTAGTGA GTGGGGAACAGGAACCGAGTTATTAA
Upstream 100 bases:
>100_bases CCGAAAAAATGTGAAGCGCCTCGCCGTTTCCACATCTCACAGTTGCCACTTATCTTCATTTTAATGAAGATGTAAACATT CATTTTATTGAAAATATATT
Downstream 100 bases:
>100_bases ACGAAAGGCATCTGATATGGAAACCAGACTCAACCTGCTTTGCGAGGCAGGCGTTATTGATAAGGACATCTGCAAAGGCA TGATGCAGGTCGTCAACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVGLTQAVLKTLESSGAIRIERRGRNGSYLVEMDNKALL SHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELT MLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPSY
Sequences:
>Translated_301_residues MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVGLTQAVLKTLESSGAIRIERRGRNGSYLVEMDNKALL SHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELT MLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPSY >Mature_301_residues MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVGLTQAVLKTLESSGAIRIERRGRNGSYLVEMDNKALL SHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELT MLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994934, Length=301, Percent_Identity=96.6777408637874, Blast_Score=602, Evalue=1e-174,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33552; Mature: 33552
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVGLTQAVLKTLESSGAIR CCCCEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE IERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAH EEECCCCCCEEEEECCCHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEE MRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALELGPHTYVGEHQLICRKGESG ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCC NVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELT CEEEECCCCCCCCHHHHHHHHCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHCCCCEE MLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPS EEEEECCCCCCCCHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Y C >Mature Secondary Structure MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVGLTQAVLKTLESSGAIR CCCCEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE IERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAH EEECCCCCCEEEEECCCHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEE MRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALELGPHTYVGEHQLICRKGESG ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCC NVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELT CEEEECCCCCCCCHHHHHHHHCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHCCCCEE MLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPS EEEEECCCCCCCCHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]