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The map label for this gene is oxc

Identifier: 187731638

GI number: 187731638

Start: 2544953

End: 2546647

Strand: Reverse

Name: oxc

Synonym: SbBS512_E2742

Alternate gene names: 187731638

Gene position: 2546647-2544953 (Counterclockwise)

Preceding gene: 187731579

Following gene: 187732206

Centisome position: 55.17

GC content: 46.49

Gene sequence:

>1695_bases
ATGTCAGATCAACTTCAAATGACAGATGGTATGCATATCATCGTTGAAGCATTAAAACAGAATAATATTGACACTATTTA
TGGTGTTGTAGGTATTCCTGTGACGGATATGGCACGCCATGCCCAGGCGGAAGGCATTCGTTATATTGGTTTTCGTCATG
AGCAGTCGGCAGGCTATGCCGCTGCGGCAAGCGGTTTTCTTACCCAAAAACCGGGGATCTGCCTGACAGTTTCTGCGCCA
GGATTCCTCAATGGTTTGACGGCATTGGCCAACGCAACGGTAAATGGTTTTCCGATGATCATGATTAGCGGCTCCAGCGA
CCGCGCGATCGTCGACCTACAGCAAGGTGATTATGAAGAGCTGGACCAAATGAATGCGGCAAAACCGTATGCCAAAGCAG
CATTTCGCGTTAATCAGCCGCAGGATCTTGGCATTGCATTGGCACGCGCTATCCGGGTCTCTGTATCGGGTCGCCCTGGC
GGAGTTTATCTTGATTTGCCAGCAAATGTCCTGGCCGCGACGATGGAAAAAGACGAAGCGTTAACCACGATTGTTAAAGT
TGAAAATCCGTCGCCAGCATTATTGCCATGCCCGAAGTCAGTCACTAGCGCAATTTCGCTTTTAGCAAAAGCTGAACGGC
CATTAATTATCCTTGGCAAAGGCGCGGCGTATTCACAAGCTGATGAACAGCTTCGTGAATTTATTGAAAGTGCTCAGATT
CCATTCCTGCCAATGTCTATGGCGAAAGGGATCCTTGAAGATACGCATCCACTTTCTGCGGCAGCTGCGCGTTCGTTTGC
CCTGGCAAATGCTGACGTTGTCATGCTTGTTGGTGCACGACTGAATTGGTTATTGGCACACGGTAAAAAAGGATGGGCGG
CAGATACACAGTTTATTCAACTGGATATTGAACCGCAGGAAATTGACAGCAACCGCCCCATTGCTGTGCCAGTCATTGGT
GATATTGCATCCAGTATGCAAGGTATGCTGGCAGAACTGAAACAAAACACATTTACGACTCCACTGGTATGGCGCGATAT
TTTAAATATCCACAAGCAGCAAAATGCACAAAAAATGCATGAAAAATTAAGTACAGATACTCAACCATTAAATTACTTTA
ATGCATTAAGTGCTGTGCGCGACGTATTGCGCGAGAACCAGGATATTTATTTAGTTAATGAAGGTGCAAATACCCTGGAT
AATGCACGAAATATTATTGATATGTATAAACCACGTCGTCGTCTGGATTGTGGTACCTGGGGTGTCATGGGCATCGGTAT
GGGCTATGCCATCGGTGCTAGCGTGACTTCTGGTTCTCCGGTTGTCGCCATTGAAGGTGATAGTGCTTTTGGTTTCAGTG
GGATGGAAATTGAAACGATTTGTCGATATAACCTGCCGGTGACGATCGTTATTTTTAATAATGGCGGCATCTACAGAGGA
GACGGTGTTGATCTCAGTGGCGCTGGTGCACCATCACCAACGGATCTGTTGCACCATGCAAGGTATGACAAATTAATGGA
TGCGTTTCGTGGCGTTGGCTATAACGTCACCACGAAAGATGAACTTCGTCATGCTTTAACCACCGGTATTCAGTCGCGCA
AACCGACCATTATTAATGTGGTCATCGACCCTGCAGCAGGAACTGAAAGTGGCCATATTACCAAACTTAACCCAAAACAA
GTCGCTGGTAATTAA

Upstream 100 bases:

>100_bases
ATAGCGACGATGAAATTGCTGCAATGAAGCAAAACCACGCCATCTGATATTAACGGGGGCTTCTGGCTCCCAATTTATAA
AAATTTCGAGGTTATTAATC

Downstream 100 bases:

>100_bases
ATACTGACATCGTCTCCTCTTGCCAACTCATTATGCGATGGTGAGGGGACCCTTATCGGAAATACTATTATGCTAACATT
TTTTATTGGCGATTTATTGC

Product: putative oxalyl-CoA decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAP
GFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQI
PFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVIG
DIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLD
NARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRG
DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTKDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQ
VAGN

Sequences:

>Translated_564_residues
MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAP
GFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQI
PFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVIG
DIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLD
NARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRG
DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTKDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQ
VAGN
>Mature_563_residues
SDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPG
FLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGG
VYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIP
FLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVIGD
IASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDN
ARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRGD
GVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTKDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQV
AGN

Specific function: Oxalic acid catabolism; second step. [C]

COG id: COG0028

COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TPP enzyme family [H]

Homologues:

Organism=Homo sapiens, GI93004078, Length=558, Percent_Identity=39.0681003584229, Blast_Score=421, Evalue=1e-117,
Organism=Homo sapiens, GI21361361, Length=581, Percent_Identity=25.1290877796902, Blast_Score=176, Evalue=5e-44,
Organism=Escherichia coli, GI1788716, Length=564, Percent_Identity=99.645390070922, Blast_Score=1158, Evalue=0.0,
Organism=Escherichia coli, GI87081685, Length=556, Percent_Identity=24.4604316546763, Blast_Score=178, Evalue=9e-46,
Organism=Escherichia coli, GI1790104, Length=477, Percent_Identity=26.8343815513627, Blast_Score=156, Evalue=4e-39,
Organism=Escherichia coli, GI1786717, Length=478, Percent_Identity=26.3598326359833, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1787096, Length=540, Percent_Identity=22.4074074074074, Blast_Score=100, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17531301, Length=549, Percent_Identity=38.0692167577413, Blast_Score=363, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI17531299, Length=549, Percent_Identity=38.0692167577413, Blast_Score=363, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI17542570, Length=514, Percent_Identity=27.2373540856031, Blast_Score=179, Evalue=4e-45,
Organism=Saccharomyces cerevisiae, GI6320816, Length=548, Percent_Identity=35.2189781021898, Blast_Score=300, Evalue=4e-82,
Organism=Saccharomyces cerevisiae, GI6323755, Length=583, Percent_Identity=24.1852487135506, Blast_Score=138, Evalue=2e-33,
Organism=Drosophila melanogaster, GI19922626, Length=561, Percent_Identity=39.7504456327986, Blast_Score=397, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017660
- InterPro:   IPR012000
- InterPro:   IPR012001
- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]

EC number: =4.1.1.8 [H]

Molecular weight: Translated: 60623; Mature: 60492

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYA
CCCCEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCEEEEEEEECCCCCCH
AAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEE
HHHCCCEECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHH
LDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEA
HHHCCCCCCHHHHHEECCCCHHHHHHHHHEEEEEECCCCCCEEEECCHHHHHHHHHHCCC
LTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQI
EEEEEEECCCCCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCC
PFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQ
CEECHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEE
LDIEPQEIDSNRPIAVPVIGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMH
EECCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTW
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCHHHCCCCCC
GVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRG
CHHHHCCCHHCCCEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEC
DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTKDELRHALTTGIQSRKPTIINV
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
VIDPAAGTESGHITKLNPKQVAGN
EEECCCCCCCCCEEECCHHHCCCC
>Mature Secondary Structure 
SDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYA
CCCEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCEEEEEEEECCCCCCH
AAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEE
HHHCCCEECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHH
LDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEA
HHHCCCCCCHHHHHEECCCCHHHHHHHHHEEEEEECCCCCCEEEECCHHHHHHHHHHCCC
LTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQI
EEEEEEECCCCCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCC
PFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQ
CEECHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEE
LDIEPQEIDSNRPIAVPVIGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMH
EECCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTW
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCHHHCCCCCC
GVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRG
CHHHHCCCHHCCCEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEC
DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTKDELRHALTTGIQSRKPTIINV
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
VIDPAAGTESGHITKLNPKQVAGN
EEECCCCCCCCCEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]