| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187731014
Identifier: 187731014
GI number: 187731014
Start: 1947386
End: 1947847
Strand: Direct
Name: 187731014
Synonym: SbBS512_E2139
Alternate gene names: NA
Gene position: 1947386-1947847 (Clockwise)
Preceding gene: 187730288
Following gene: 187733368
Centisome position: 42.19
GC content: 43.51
Gene sequence:
>462_bases GTGTTGACTGGTCTTCTTTCAGGATGCGTTGATGGCAATTCACCCTCTGGCAGTCAGGAAGGTGTCGTGAAAGCGGATCC TCGCTATTCAGAATGTAACCTCCCTGATGTAAATGAAAGAGGGCCAATTGCTGCGGGTCTTTACATTTCCGGAACCCTCC CGGAAGGCTATTGGTTAATGAAGCCAGAGCGTAAAATGCATTATAAGGGAGATGGTATTTATCAGCTTATTTATTCTGAA AAAGCAGGTGCGGTAACAATGCAATTTGCGACTATGAACTGGAATCCGCAGTTCACTGTAACAGGTCTTGAATTGCCATT AAATCAGGCTAAAACACTCAAGAAAGGAGGCATGGATAAAAATACAAAAGTCGTCATTCCTGCCGATGGAAAGTATGTTT GGACGATTCAAATTGGTCCTGATAAAAAGGCAATAGCCGCCATGGTAGCACCATGTAAATAG
Upstream 100 bases:
>100_bases AACATTAACATTAACATTAACACTGACATAGAAATAGCTTAACTAAGCTATACTACTTTTATTGAGAGTTTAAATGAAAA ATAAATTGCTTATTGCGGCT
Downstream 100 bases:
>100_bases TTATTTTTAGCACTCCACTATTCAACATTCGTTGAATAGTGGAGTATCAGTATTCCAAAATTCTTGTTAATGAGAGCAGA TTATGGCCGCGGTAATTCTA
Product: glycosidase
Products: NA
Alternate protein names: CymC Protein
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MLTGLLSGCVDGNSPSGSQEGVVKADPRYSECNLPDVNERGPIAAGLYISGTLPEGYWLMKPERKMHYKGDGIYQLIYSE KAGAVTMQFATMNWNPQFTVTGLELPLNQAKTLKKGGMDKNTKVVIPADGKYVWTIQIGPDKKAIAAMVAPCK
Sequences:
>Translated_153_residues MLTGLLSGCVDGNSPSGSQEGVVKADPRYSECNLPDVNERGPIAAGLYISGTLPEGYWLMKPERKMHYKGDGIYQLIYSE KAGAVTMQFATMNWNPQFTVTGLELPLNQAKTLKKGGMDKNTKVVIPADGKYVWTIQIGPDKKAIAAMVAPCK >Mature_153_residues MLTGLLSGCVDGNSPSGSQEGVVKADPRYSECNLPDVNERGPIAAGLYISGTLPEGYWLMKPERKMHYKGDGIYQLIYSE KAGAVTMQFATMNWNPQFTVTGLELPLNQAKTLKKGGMDKNTKVVIPADGKYVWTIQIGPDKKAIAAMVAPCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16583; Mature: 16583
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGLLSGCVDGNSPSGSQEGVVKADPRYSECNLPDVNERGPIAAGLYISGTLPEGYWLM CCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEE KPERKMHYKGDGIYQLIYSEKAGAVTMQFATMNWNPQFTVTGLELPLNQAKTLKKGGMDK CCCCEEEECCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHCCCCC NTKVVIPADGKYVWTIQIGPDKKAIAAMVAPCK CCEEEEECCCCEEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure MLTGLLSGCVDGNSPSGSQEGVVKADPRYSECNLPDVNERGPIAAGLYISGTLPEGYWLM CCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEE KPERKMHYKGDGIYQLIYSEKAGAVTMQFATMNWNPQFTVTGLELPLNQAKTLKKGGMDK CCCCEEEECCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHCCCCC NTKVVIPADGKYVWTIQIGPDKKAIAAMVAPCK CCEEEEECCCCEEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA