| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is uvrA [H]
Identifier: 187736652
GI number: 187736652
Start: 2653644
End: 2659166
Strand: Reverse
Name: uvrA [H]
Synonym: Amuc_2176
Alternate gene names: 187736652
Gene position: 2659166-2653644 (Counterclockwise)
Preceding gene: NA
Following gene: 187736650
Centisome position: 99.81
GC content: 61.4
Gene sequence:
>5523_bases ATGAGTCATTGTGAGGATGGGCGCATCCGCATCCGCGGCGCCCGTGAGCATAATTTGCAGAATGTGGATGTGGACATTCC CCTGGGGCGGCTGACGGTGGTGACGGGACCTTCCGGATCGGGGAAAACAAGTCTGGCCATGCACACGCTGTATGCGGAAG GCCAGCGGCGTTATATGGAAACCTTTTCCCCGTACGTGCGCCAGTTCATGGACCGCATGGACAAGCCGGATGTGGACGCC GTAGAGAATATTCTTCCGGCCATCGCCCTGCATCAGCGCAACTCCGTCAGGACATCCCGCTCCACGGTGGGGACCATGAC GGGGCTGAATGATTACTGGAAGTTTGTTTTCGCCCGTCTGGCCGTGGGCATTGACCCGGAAACAGGGCGGGAAATCAAGC CGGAAACGCCAGGTACCATTGATGAAAAGTTGCATTCGGAATTCCCTGCCGGAACGGAAGTGATGGTTTGCCTGGAGGTG GCGCGGCCCGAATCCGTGGATCTTCCCTCGTTGAAAAGGAATCTGGTGGCACAGGGGTATTTGCGCGCTTTTGCGCATGG AGAGATCCTCCGGCTGGAGGATGAGGATTGGACGCTGGAGGAAGGAGAACCGCTGCTGGTGGTTCAGGACCGCGTGAGGC TGTCGGAAGACCAGAGGGAACGCAGGCTGGAGGCTCTGGAGACGGCCATGCGCCTGGGCGGCGGCGTGGCCCATGTGATT CCCCGTGTGGACGGCGTCTGGTTGTCCGCTTTGAAATTCCGCGGAGACTGGCATCCGCTGATGGAACCGCGGCCGGGCCT GTTTTCTTTTAATTCCCCGCTGGGGGCGTGCCCGGAATGCCGCGGCTACGGGCGCGTCATCACGATTGACTACAACCGGT GCATCAGGCCGGAACTCAGCGTTCAGGACGGGGCCATCCATATTTTTGAGGGGGACGGAAAAGTATTTTCCGAATGCAAG CGGGACCTGATGCGCGGCTGGCGCAAAAACGCCCGCAAAGTCCGTCTGGATGTGCCGTGGAAGGATTTGAAGCAATGGGA GCGGGACTGGCTGCTGTACGGCGACGGCGATGACCCGGATGAAATGTATGAACAGGGGCTGTGGTACGGCATTGCGGGAT TTTTCAAATATCTGGAAAGCCGCACGCATAAGATGCACGTGCGGGTGTACCTGAGCCGTTTCCGCACATATCAGGAATGC CCCTCCTGCCACGGTTTGCGCCTGAGGCCGGAAGCCCTTCAATTCAAGGTGGGCGGCAAAAGCATGCCGGAACTTTCCAG TATGCCCATGGATGAACTGCTGGTCTGGGTGGATAGGTACGTGACGCCGCGGGCGGATGAAGACCCCGGCTTGAAACATG CCGTGGCGGAACTCAGGAGCCGCCTGGAATATCTGAATGAAGTGGGATTGGGCTACCTGACGTCCGACCGCTCCACGCGG TCCCTGTCCGGAGGGGAAATTGAACGCGTGAGCCTGACGACCTGCCTGGGCGCTTCCCTGACGGATACGCTGTTTGTGCT GGATGAACCTACCGTTGGGCTCCATCCCCGCGATACGTCCCGTTTGATTTCCGCCATGAACCGGCTTAAAAAGCGCGGGA ATACCCTGGTGGTGGTGGAGCATGAGGAAGCGGTCATGCGTGCCGCGGACTGCCTGGTGGATATGGGACCCGGTTCCGGA CGGGAAGGGGGAAGGCTGGTTTATTCCGGGATGCCTGCCCGGATTGGAGAAATTGAGGAATCCCTGACGGGAGCTTTTCT TTCCGGCAGGCGGCGCATCGCGGTGCCCAAAAGGAGGCGAAAGCCGCGCCAGTTTCTGACCGTATCCGGAGCCACGCGCC ATAACCTGCGCAAACTGGACGTGAAAGTGCCCCTGGGCCTCTTCACTTGCTTGACAGGCGTCAGCGGGTCCGGGAAAAGC ACCCTGGCCCACGATGTTCTTTACCTGAACGCGCTGGTGGAGAAAGGAGCCGTATGCGAGGAGGAACCCGCCCGCGTCAA GTCTATCAAGGGCTGGGAACATCTGGATGAGGTGGTGATGGTGGACCAGAGCCCCATCGTCCGCACCCCGCGCTCCACCC CTGCCGTGTATGCCGGAGTTTTTGAAGAAATACGCTCCCTCTTCGCGGAAACGGAGACGGCCCGCGCGCGCGGCATGAAG CCCGGTTTTTTCTCTTTCAACAGTGGGGACGGCCGGTGTCCGCGCTGCATGGGCATGGGGAGTGAGAAAGTGGAAATGCA GTTTCTTTCCGACATTTTCGTTCAGTGTCCGCTGTGCCACGGCTCCCGGTACGGGAGCGAAGTGCTGAGCGTGTACCGTG ACGGCAGGAATATTGCGGACGTGCTCGGCATGACGGTAGCGGCTGCGCTGGAATGCTTCAGCGCGGAAAAAGGGGCCAAA GCCTCCCGCATCGCTTCCAAACTGGGCGTGCTTCAGCGCGTAGGGCTGGGGCACCTGACCCTGGGGCAGCCTCTGAATAC CCTTTCCGGCGGGGAAAACCAGCGCCTGAAGCTGGCTAAAATTCTGCTGGACCAGATAGGTTCCGGCGCGAACAGCTCCA AGATGCTGATTCTGGACGAGCCGGGAACGGGGCTTCACTTTGCAGACATTGAAGTTCTGCTGGCCGTGTTTCGGGAACTG GTGGAGCAGGGGCATACCCTGCTGGTCATCGAACACAACCCGGAGTTCATCAAATCCGCGGACTACGTGATTGACCTGGG GCCGGAGGGCGGCGCCGGAGGCGGCCATGTGGTGGCCACGGGTACGCCGGAGGAAATCGTAGCCGCCGGGAAGGGATACA CGGGCAAATACCTCAGGGAGGTTCTGGAAGGCAACCCTTCCGTTTACGACCCTGCGGACGCCGCCGTCCCGGAATCCGCA GACATGGATATACCGGAAGGCGTGATGGCCCTGCGGGGAGCGCGCCACCACAACCTGAAAAACGTGGACCTGGACGTGCC TCGCGGAGAAATGACCGTGCTGACCGGGCTTTCCGGCTCCGGGAAGAGCTCCCTGGCTTTTGATATCTTTTTCGCGGAAG GGCAGCGGCGTTTCATGGACGTCATGTCCCCGTACGCCCGGCAATTCACGGAACAGCTGGAAAGTCCGGACATCGACCGC CTGACCGGATTGCCCCCCACGGTGGCTATTGAACAGAACATGTCCCGCGGGGGCACCAAATCCACCGTGGGAACCGTCAC GGAAATCTGGCAATTCATGCGTCTGCTGTATGCCAAGCTGGGGCAGGCCTATTGCCCGCAGTGCGGTGTTCCGGTGGGCA AAAGGTCGGAATCGGAAGTGGTGGAGCTGGTGGCGAGGGAACTGAAAAAACATGGCGGACTCGCGTTGCTGGCCCCCCTC GTCAGGGGACGCAAGGGGCATTACGCCGACCTGGCCCGCTGGGCGGAAGGAAAGGGATATGAGGAAATGTGGGTGGACGG CAAACTGGTTCCCCTGAGCGGATTCCAGCCGCTGGACCGCTATTCCAGCCATGACCTGGACCTGGTCGTTGCACGGCCGG AGGCCTCCTGGCCGCCGGAAAAGCTTGCCGGGGCGGTTCATGCCGCGCTGGAGATGGGGGAAGGGTTCCTGCAGGTGCTC CCGCCCGGTTCCGTCCGTCCGGAACTGATGGGCACCAGGCTGGCATGCGCCTCCTGCGGGCAATCTTTCCCGGAACTGGA ACCGTACACGTTTTCCTTCAACTCTCCGCGCGGGTGGTGCCCCGTATGCCGCGGGCATGGAATCGTCGGCAGGGGGAAAG TAAAGGAAGACCAGGCGCAATCCCTGCTGGAGGCTGAACTGAAATATGACAGGGAACTGGCGCGGCAGGCGGACGATGAC AAGGGAATAACAACCTGCCCTGCCTGCCGGGGCGTGCGGTTGAATGAATTTGCTCGCGCCGTGCGGCTTCAGGGAGTGAC TCCCGGTGACATTGCCTCCCTGCCTGCCGTGGCCGCCGCAGAACTGGTCAAAGGGTGGCAATTTGAACGGGAGGAAGCGC TCATTGCCCGTGACGTAGTGGCGGAAATCACGCAGCGCCTCAACTTCCTCCAGCGGGTGGGGCTGGGCTACCTTTCCCTG GACCGGAGCGCCACGACGCTCTCCGGCGGGGAGACCCAGCGCATCCGTCTGGCTTCCCAGCTGGGTTCCCACCTCCGCGG TGTGCTGTACGTGCTGGATGAACCGACCATCGGCCTGCATCCGCGGGACAACGAATTGCTGCTGGGCACGTTGGATGAAC TCAAACGCCGGGGCAACACCCTGCTGGTGGTGGAACATGATGAAGATACCATGAGGCGCGCGGACCATATTGTGGACATG GGACCGGGAGCCGGCATTCATGGCGGCAGAATCATGGCCCAGGGCACCTTTGAGGAACTGGCCGCCATGCCGGACTCCGT CACGGGCGCGGCCCTGCACCATAAGCCCAGGCATCCCTACCGCGGGAAAAGGCGCAGGATTCCGTCCCAAAAGGATGAAT CCGCGTGGCTGCGCGTGGAGGGCTGCTGCCTGCACAACCTGAAGGGGGTGAACGTTGCCATTCCCAAGGGGAGGCTGACG GTGCTCACCGGCGTATCCGGAGCGGGGAAAACTTCCCTGATGACGGGAACCATCCGTCTGGCTGCGCGCCAGGCCATCGG CGACAAGCTCACGAGGGAGCAGAGAAAATTATGGAAAACCTCTTCCGGCTTTGACTCCATCCGCATGGTGTACGGCGTGG ACCAGAACCCCATCGGCAAAACGCCCCGTTCCACCCCGGCCACCTACGTGGGTTTCCTGGACGACATCCGGACCCTGTTC GCGCAGACGGCGGATGCCCGCAGGCTGGGCTTTGACCGCGGCCGTTTCTCCTTCAATACGGGGCAGGGCAACTGTGAATC CTGCAAGGGCACGGGCATGCAAAAGCTGGAAATGGACTTCCTGCCCCCCTGTTATGTGCCGTGCGAGACCTGCCGGGGCA AGCGCTACAACGCCGCCACCCTGACCGTGAGGTACAAGGGGAAGACCATTGCGGACGTGCTCCAGATGGACTTTGCGGAA GCGGCGGAATTTTTTGAAAGCCAGCCCCGCATTTCGGACCCCCTCAAACTGCTGTCGGAAACCGGCCTGGGTTATCTGAC GCTGGGGCAGGCCTCCAACACGCTTTCCGGCGGGGAAGCCCAGCGGCTCAAGCTGGTGACGGAACTCATCAAGGGCCGGC GCGTCAGCCGGAACGCCCTGATGAAAGGCAGGGAACTGCCCGGAGACCTGTACCTGATTGAAGAACCCTCCATCGGCCTG CATCCGCGGGATGTGCGGCTGCTCATTGACGTGCTGCACCGTCTGGCGGACCAGGGGAACACCGTCGTTGTCATTGAACA TAACACGGAAATCATGGCGGAGGCGGACTACGTCATCGACATGGGCCCCGGACCCGGCGATGCCGGAGGAACCATCGTGG CGGAAGGCACGCCGGAGCAGATAGCCGGGAAAAAATCCCCCACTGCGGAATACATCCGCCGGGAACTGAATGGGGAGTCT TAG
Upstream 100 bases:
>100_bases CGTAATAGGAAGGTTGGACCTGGCCGGACTCCTCTGGAAACCCGGATTCATGACAGGCGCTTCTCTTGGAATGATTCCAA ATTGATGATATTCTTTCTCC
Downstream 100 bases:
>100_bases GCAGGAGGAAGGATCAATAAGGCACTCAGGGCCGTTCCGGGAATGCCGGGGCGGCCACCGGATTCGCCTGCCTTTTTCTG TTCCGTGAAAACAGGCATGG
Product: excinuclease ABC, A subunit
Products: NA
Alternate protein names: UvrA protein; Excinuclease ABC subunit A [H]
Number of amino acids: Translated: 1840; Mature: 1839
Protein sequence:
>1840_residues MSHCEDGRIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYMETFSPYVRQFMDRMDKPDVDA VENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARLAVGIDPETGREIKPETPGTIDEKLHSEFPAGTEVMVCLEV ARPESVDLPSLKRNLVAQGYLRAFAHGEILRLEDEDWTLEEGEPLLVVQDRVRLSEDQRERRLEALETAMRLGGGVAHVI PRVDGVWLSALKFRGDWHPLMEPRPGLFSFNSPLGACPECRGYGRVITIDYNRCIRPELSVQDGAIHIFEGDGKVFSECK RDLMRGWRKNARKVRLDVPWKDLKQWERDWLLYGDGDDPDEMYEQGLWYGIAGFFKYLESRTHKMHVRVYLSRFRTYQEC PSCHGLRLRPEALQFKVGGKSMPELSSMPMDELLVWVDRYVTPRADEDPGLKHAVAELRSRLEYLNEVGLGYLTSDRSTR SLSGGEIERVSLTTCLGASLTDTLFVLDEPTVGLHPRDTSRLISAMNRLKKRGNTLVVVEHEEAVMRAADCLVDMGPGSG REGGRLVYSGMPARIGEIEESLTGAFLSGRRRIAVPKRRRKPRQFLTVSGATRHNLRKLDVKVPLGLFTCLTGVSGSGKS TLAHDVLYLNALVEKGAVCEEEPARVKSIKGWEHLDEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSLFAETETARARGMK PGFFSFNSGDGRCPRCMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSEVLSVYRDGRNIADVLGMTVAAALECFSAEKGAK ASRIASKLGVLQRVGLGHLTLGQPLNTLSGGENQRLKLAKILLDQIGSGANSSKMLILDEPGTGLHFADIEVLLAVFREL VEQGHTLLVIEHNPEFIKSADYVIDLGPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVLEGNPSVYDPADAAVPESA DMDIPEGVMALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYARQFTEQLESPDIDR LTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKLGQAYCPQCGVPVGKRSESEVVELVARELKKHGGLALLAPL VRGRKGHYADLARWAEGKGYEEMWVDGKLVPLSGFQPLDRYSSHDLDLVVARPEASWPPEKLAGAVHAALEMGEGFLQVL PPGSVRPELMGTRLACASCGQSFPELEPYTFSFNSPRGWCPVCRGHGIVGRGKVKEDQAQSLLEAELKYDRELARQADDD KGITTCPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFEREEALIARDVVAEITQRLNFLQRVGLGYLSL DRSATTLSGGETQRIRLASQLGSHLRGVLYVLDEPTIGLHPRDNELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDM GPGAGIHGGRIMAQGTFEELAAMPDSVTGAALHHKPRHPYRGKRRRIPSQKDESAWLRVEGCCLHNLKGVNVAIPKGRLT VLTGVSGAGKTSLMTGTIRLAARQAIGDKLTREQRKLWKTSSGFDSIRMVYGVDQNPIGKTPRSTPATYVGFLDDIRTLF AQTADARRLGFDRGRFSFNTGQGNCESCKGTGMQKLEMDFLPPCYVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAE AAEFFESQPRISDPLKLLSETGLGYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDLYLIEEPSIGL HPRDVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGGTIVAEGTPEQIAGKKSPTAEYIRRELNGES
Sequences:
>Translated_1840_residues MSHCEDGRIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYMETFSPYVRQFMDRMDKPDVDA VENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARLAVGIDPETGREIKPETPGTIDEKLHSEFPAGTEVMVCLEV ARPESVDLPSLKRNLVAQGYLRAFAHGEILRLEDEDWTLEEGEPLLVVQDRVRLSEDQRERRLEALETAMRLGGGVAHVI PRVDGVWLSALKFRGDWHPLMEPRPGLFSFNSPLGACPECRGYGRVITIDYNRCIRPELSVQDGAIHIFEGDGKVFSECK RDLMRGWRKNARKVRLDVPWKDLKQWERDWLLYGDGDDPDEMYEQGLWYGIAGFFKYLESRTHKMHVRVYLSRFRTYQEC PSCHGLRLRPEALQFKVGGKSMPELSSMPMDELLVWVDRYVTPRADEDPGLKHAVAELRSRLEYLNEVGLGYLTSDRSTR SLSGGEIERVSLTTCLGASLTDTLFVLDEPTVGLHPRDTSRLISAMNRLKKRGNTLVVVEHEEAVMRAADCLVDMGPGSG REGGRLVYSGMPARIGEIEESLTGAFLSGRRRIAVPKRRRKPRQFLTVSGATRHNLRKLDVKVPLGLFTCLTGVSGSGKS TLAHDVLYLNALVEKGAVCEEEPARVKSIKGWEHLDEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSLFAETETARARGMK PGFFSFNSGDGRCPRCMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSEVLSVYRDGRNIADVLGMTVAAALECFSAEKGAK ASRIASKLGVLQRVGLGHLTLGQPLNTLSGGENQRLKLAKILLDQIGSGANSSKMLILDEPGTGLHFADIEVLLAVFREL VEQGHTLLVIEHNPEFIKSADYVIDLGPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVLEGNPSVYDPADAAVPESA DMDIPEGVMALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYARQFTEQLESPDIDR LTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKLGQAYCPQCGVPVGKRSESEVVELVARELKKHGGLALLAPL VRGRKGHYADLARWAEGKGYEEMWVDGKLVPLSGFQPLDRYSSHDLDLVVARPEASWPPEKLAGAVHAALEMGEGFLQVL PPGSVRPELMGTRLACASCGQSFPELEPYTFSFNSPRGWCPVCRGHGIVGRGKVKEDQAQSLLEAELKYDRELARQADDD KGITTCPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFEREEALIARDVVAEITQRLNFLQRVGLGYLSL DRSATTLSGGETQRIRLASQLGSHLRGVLYVLDEPTIGLHPRDNELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDM GPGAGIHGGRIMAQGTFEELAAMPDSVTGAALHHKPRHPYRGKRRRIPSQKDESAWLRVEGCCLHNLKGVNVAIPKGRLT VLTGVSGAGKTSLMTGTIRLAARQAIGDKLTREQRKLWKTSSGFDSIRMVYGVDQNPIGKTPRSTPATYVGFLDDIRTLF AQTADARRLGFDRGRFSFNTGQGNCESCKGTGMQKLEMDFLPPCYVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAE AAEFFESQPRISDPLKLLSETGLGYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDLYLIEEPSIGL HPRDVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGGTIVAEGTPEQIAGKKSPTAEYIRRELNGES >Mature_1839_residues SHCEDGRIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYMETFSPYVRQFMDRMDKPDVDAV ENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARLAVGIDPETGREIKPETPGTIDEKLHSEFPAGTEVMVCLEVA RPESVDLPSLKRNLVAQGYLRAFAHGEILRLEDEDWTLEEGEPLLVVQDRVRLSEDQRERRLEALETAMRLGGGVAHVIP RVDGVWLSALKFRGDWHPLMEPRPGLFSFNSPLGACPECRGYGRVITIDYNRCIRPELSVQDGAIHIFEGDGKVFSECKR DLMRGWRKNARKVRLDVPWKDLKQWERDWLLYGDGDDPDEMYEQGLWYGIAGFFKYLESRTHKMHVRVYLSRFRTYQECP SCHGLRLRPEALQFKVGGKSMPELSSMPMDELLVWVDRYVTPRADEDPGLKHAVAELRSRLEYLNEVGLGYLTSDRSTRS LSGGEIERVSLTTCLGASLTDTLFVLDEPTVGLHPRDTSRLISAMNRLKKRGNTLVVVEHEEAVMRAADCLVDMGPGSGR EGGRLVYSGMPARIGEIEESLTGAFLSGRRRIAVPKRRRKPRQFLTVSGATRHNLRKLDVKVPLGLFTCLTGVSGSGKST LAHDVLYLNALVEKGAVCEEEPARVKSIKGWEHLDEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSLFAETETARARGMKP GFFSFNSGDGRCPRCMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSEVLSVYRDGRNIADVLGMTVAAALECFSAEKGAKA SRIASKLGVLQRVGLGHLTLGQPLNTLSGGENQRLKLAKILLDQIGSGANSSKMLILDEPGTGLHFADIEVLLAVFRELV EQGHTLLVIEHNPEFIKSADYVIDLGPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVLEGNPSVYDPADAAVPESAD MDIPEGVMALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYARQFTEQLESPDIDRL TGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKLGQAYCPQCGVPVGKRSESEVVELVARELKKHGGLALLAPLV RGRKGHYADLARWAEGKGYEEMWVDGKLVPLSGFQPLDRYSSHDLDLVVARPEASWPPEKLAGAVHAALEMGEGFLQVLP PGSVRPELMGTRLACASCGQSFPELEPYTFSFNSPRGWCPVCRGHGIVGRGKVKEDQAQSLLEAELKYDRELARQADDDK GITTCPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFEREEALIARDVVAEITQRLNFLQRVGLGYLSLD RSATTLSGGETQRIRLASQLGSHLRGVLYVLDEPTIGLHPRDNELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDMG PGAGIHGGRIMAQGTFEELAAMPDSVTGAALHHKPRHPYRGKRRRIPSQKDESAWLRVEGCCLHNLKGVNVAIPKGRLTV LTGVSGAGKTSLMTGTIRLAARQAIGDKLTREQRKLWKTSSGFDSIRMVYGVDQNPIGKTPRSTPATYVGFLDDIRTLFA QTADARRLGFDRGRFSFNTGQGNCESCKGTGMQKLEMDFLPPCYVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAEA AEFFESQPRISDPLKLLSETGLGYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDLYLIEEPSIGLH PRDVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGGTIVAEGTPEQIAGKKSPTAEYIRRELNGES
Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ABC transporter domains [H]
Homologues:
Organism=Escherichia coli, GI2367343, Length=957, Percent_Identity=41.3793103448276, Blast_Score=665, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR013815 - InterPro: IPR004602 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 202771; Mature: 202639
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHCEDGRIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYME CCCCCCCCEEEEECCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH TFSPYVRQFMDRMDKPDVDAVENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH AVGIDPETGREIKPETPGTIDEKLHSEFPAGTEVMVCLEVARPESVDLPSLKRNLVAQGY HHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH LRAFAHGEILRLEDEDWTLEEGEPLLVVQDRVRLSEDQRERRLEALETAMRLGGGVAHVI HHHHCCCCEEEECCCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHHCCCHHHHH PRVDGVWLSALKFRGDWHPLMEPRPGLFSFNSPLGACPECRGYGRVITIDYNRCIRPELS HCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC VQDGAIHIFEGDGKVFSECKRDLMRGWRKNARKVRLDVPWKDLKQWERDWLLYGDGDDPD CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCEEEECCCCCHH EMYEQGLWYGIAGFFKYLESRTHKMHVRVYLSRFRTYQECPSCHGLRLRPEALQFKVGGK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHEEEEECCC SMPELSSMPMDELLVWVDRYVTPRADEDPGLKHAVAELRSRLEYLNEVGLGYLTSDRSTR CCCHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCC SLSGGEIERVSLTTCLGASLTDTLFVLDEPTVGLHPRDTSRLISAMNRLKKRGNTLVVVE CCCCCCEEEEEEHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE HEEAVMRAADCLVDMGPGSGREGGRLVYSGMPARIGEIEESLTGAFLSGRRRIAVPKRRR CHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCHHHC KPRQFLTVSGATRHNLRKLDVKVPLGLFTCLTGVSGSGKSTLAHDVLYLNALVEKGAVCE CCCCEEEECCCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC EEPARVKSIKGWEHLDEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSLFAETETARARGMK CCCHHHHHCCCHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PGFFSFNSGDGRCPRCMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSEVLSVYRDGRNIAD CCCEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHH VLGMTVAAALECFSAEKGAKASRIASKLGVLQRVGLGHLTLGQPLNTLSGGENQRLKLAK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHCCCCCCCHHHHHH ILLDQIGSGANSSKMLILDEPGTGLHFADIEVLLAVFRELVEQGHTLLVIEHNPEFIKSA HHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCC DYVIDLGPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVLEGNPSVYDPADAAVPESA CEEEEECCCCCCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC DMDIPEGVMALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMD CCCCCHHHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHHH VMSPYARQFTEQLESPDIDRLTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKL HHHHHHHHHHHHHCCCCCHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GQAYCPQCGVPVGKRSESEVVELVARELKKHGGLALLAPLVRGRKGHYADLARWAEGKGY CHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCHHHHHHHHCCCCC EEMWVDGKLVPLSGFQPLDRYSSHDLDLVVARPEASWPPEKLAGAVHAALEMGEGFLQVL HHHEECCEEEECCCCCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEC PPGSVRPELMGTRLACASCGQSFPELEPYTFSFNSPRGWCPVCRGHGIVGRGKVKEDQAQ CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHH SLLEAELKYDRELARQADDDKGITTCPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAA HHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCHHHHCHHHHHH ELVKGWQFEREEALIARDVVAEITQRLNFLQRVGLGYLSLDRSATTLSGGETQRIRLASQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHH LGSHLRGVLYVLDEPTIGLHPRDNELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDM HHHHHCEEEEEECCCCCCCCCCCCCEEEECHHHHHHCCCEEEEEECCHHHHHHHHHHEEC GPGAGIHGGRIMAQGTFEELAAMPDSVTGAALHHKPRHPYRGKRRRIPSQKDESAWLRVE CCCCCCCCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCEEEEE GCCLHNLKGVNVAIPKGRLTVLTGVSGAGKTSLMTGTIRLAARQAIGDKLTREQRKLWKT CEEECCCCCCEEEECCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC SSGFDSIRMVYGVDQNPIGKTPRSTPATYVGFLDDIRTLFAQTADARRLGFDRGRFSFNT CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECC GQGNCESCKGTGMQKLEMDFLPPCYVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAE CCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHH AAEFFESQPRISDPLKLLSETGLGYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNAL HHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH MKGRELPGDLYLIEEPSIGLHPRDVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVID HCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCEEEE MGPGPGDAGGTIVAEGTPEQIAGKKSPTAEYIRRELNGES CCCCCCCCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure SHCEDGRIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYME CCCCCCCEEEEECCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH TFSPYVRQFMDRMDKPDVDAVENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH AVGIDPETGREIKPETPGTIDEKLHSEFPAGTEVMVCLEVARPESVDLPSLKRNLVAQGY HHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH LRAFAHGEILRLEDEDWTLEEGEPLLVVQDRVRLSEDQRERRLEALETAMRLGGGVAHVI HHHHCCCCEEEECCCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHHCCCHHHHH PRVDGVWLSALKFRGDWHPLMEPRPGLFSFNSPLGACPECRGYGRVITIDYNRCIRPELS HCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC VQDGAIHIFEGDGKVFSECKRDLMRGWRKNARKVRLDVPWKDLKQWERDWLLYGDGDDPD CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCEEEECCCCCHH EMYEQGLWYGIAGFFKYLESRTHKMHVRVYLSRFRTYQECPSCHGLRLRPEALQFKVGGK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHEEEEECCC SMPELSSMPMDELLVWVDRYVTPRADEDPGLKHAVAELRSRLEYLNEVGLGYLTSDRSTR CCCHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCC SLSGGEIERVSLTTCLGASLTDTLFVLDEPTVGLHPRDTSRLISAMNRLKKRGNTLVVVE CCCCCCEEEEEEHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE HEEAVMRAADCLVDMGPGSGREGGRLVYSGMPARIGEIEESLTGAFLSGRRRIAVPKRRR CHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCHHHC KPRQFLTVSGATRHNLRKLDVKVPLGLFTCLTGVSGSGKSTLAHDVLYLNALVEKGAVCE CCCCEEEECCCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC EEPARVKSIKGWEHLDEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSLFAETETARARGMK CCCHHHHHCCCHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PGFFSFNSGDGRCPRCMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSEVLSVYRDGRNIAD CCCEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHH VLGMTVAAALECFSAEKGAKASRIASKLGVLQRVGLGHLTLGQPLNTLSGGENQRLKLAK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHCCCCCCCHHHHHH ILLDQIGSGANSSKMLILDEPGTGLHFADIEVLLAVFRELVEQGHTLLVIEHNPEFIKSA HHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCC DYVIDLGPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVLEGNPSVYDPADAAVPESA CEEEEECCCCCCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC DMDIPEGVMALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMD CCCCCHHHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHHH VMSPYARQFTEQLESPDIDRLTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKL HHHHHHHHHHHHHCCCCCHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GQAYCPQCGVPVGKRSESEVVELVARELKKHGGLALLAPLVRGRKGHYADLARWAEGKGY CHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCHHHHHHHHCCCCC EEMWVDGKLVPLSGFQPLDRYSSHDLDLVVARPEASWPPEKLAGAVHAALEMGEGFLQVL HHHEECCEEEECCCCCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEC PPGSVRPELMGTRLACASCGQSFPELEPYTFSFNSPRGWCPVCRGHGIVGRGKVKEDQAQ CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHH SLLEAELKYDRELARQADDDKGITTCPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAA HHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCHHHHCHHHHHH ELVKGWQFEREEALIARDVVAEITQRLNFLQRVGLGYLSLDRSATTLSGGETQRIRLASQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHH LGSHLRGVLYVLDEPTIGLHPRDNELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDM HHHHHCEEEEEECCCCCCCCCCCCCEEEECHHHHHHCCCEEEEEECCHHHHHHHHHHEEC GPGAGIHGGRIMAQGTFEELAAMPDSVTGAALHHKPRHPYRGKRRRIPSQKDESAWLRVE CCCCCCCCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCEEEEE GCCLHNLKGVNVAIPKGRLTVLTGVSGAGKTSLMTGTIRLAARQAIGDKLTREQRKLWKT CEEECCCCCCEEEECCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC SSGFDSIRMVYGVDQNPIGKTPRSTPATYVGFLDDIRTLFAQTADARRLGFDRGRFSFNT CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECC GQGNCESCKGTGMQKLEMDFLPPCYVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAE CCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHH AAEFFESQPRISDPLKLLSETGLGYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNAL HHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH MKGRELPGDLYLIEEPSIGLHPRDVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVID HCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCEEEE MGPGPGDAGGTIVAEGTPEQIAGKKSPTAEYIRRELNGES CCCCCCCCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]