Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736650

Identifier: 187736650

GI number: 187736650

Start: 2651945

End: 2652319

Strand: Reverse

Name: 187736650

Synonym: Amuc_2174

Alternate gene names: NA

Gene position: 2652319-2651945 (Counterclockwise)

Preceding gene: 187736652

Following gene: 187736647

Centisome position: 99.56

GC content: 53.87

Gene sequence:

>375_bases
ATGAGAGAGTCCGTCATGGCCTCTTCCCCGGATGTAGTAGAATATATTTGTTTCCAGCTCCGGCATGCCGGGGATATTTC
CTTCAGAAAAATGTTTGGGGACTACGGATTGTACTGCGGCCGGACATTCTTCGGTTTGGTGTGTGACAACCAGTTGTATG
TCAAGATAACGGAGCCGGGTTTGAAGATGTTTCCGCAACAGGAGCAGGGCTGCCCCTATCCCGGCGCCAGGCCGCATTTC
CTGGTGACGGAGCTGGACGATGACCGGATCCTTTCCTCCCTTGTCAGGGAGACATGCTCCGTTCTGGCTGTTCCGTCTGT
TCTGGAGGGGAAGAAGAAAAAGGCGTCCGGTGAAAAAAGAAGCAGGCGCCCTTAG

Upstream 100 bases:

>100_bases
GGGCATGCTGCGCGCCTTTTCTCGTCAATAACGGGGATGCCTCATTCCTGCCGGAATCCTTCCCGGCCGTCATTTGCTTC
TTGCAGCGGACGGGGGAGGC

Downstream 100 bases:

>100_bases
ACGCCTGCCGGCAGGAAATGGCTGCTGGAGAGGAAGGTTATTTTCCGGGAGTTTCCGGAGCGGCCAGGGAGGAGAGGTTC
TTCTTCAGGTTGGCGGCGGC

Product: TfoX domain protein

Products: NA

Alternate protein names: TfoX Domain Protein; TfoX-Like Protein; TfoX N- Domain Family Protein; Competence-Specific Protein; TfoX N-Terminal Domain-Containing Protein; Regulator Of Competence-Specific Genes; Regulator Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRESVMASSPDVVEYICFQLRHAGDISFRKMFGDYGLYCGRTFFGLVCDNQLYVKITEPGLKMFPQQEQGCPYPGARPHF
LVTELDDDRILSSLVRETCSVLAVPSVLEGKKKKASGEKRSRRP

Sequences:

>Translated_124_residues
MRESVMASSPDVVEYICFQLRHAGDISFRKMFGDYGLYCGRTFFGLVCDNQLYVKITEPGLKMFPQQEQGCPYPGARPHF
LVTELDDDRILSSLVRETCSVLAVPSVLEGKKKKASGEKRSRRP
>Mature_124_residues
MRESVMASSPDVVEYICFQLRHAGDISFRKMFGDYGLYCGRTFFGLVCDNQLYVKITEPGLKMFPQQEQGCPYPGARPHF
LVTELDDDRILSSLVRETCSVLAVPSVLEGKKKKASGEKRSRRP

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14026; Mature: 14026

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESVMASSPDVVEYICFQLRHAGDISFRKMFGDYGLYCGRTFFGLVCDNQLYVKITEPG
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHEEECCEEEEEECCCC
LKMFPQQEQGCPYPGARPHFLVTELDDDRILSSLVRETCSVLAVPSVLEGKKKKASGEKR
CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHCCCCHHCCCCCC
SRRP
CCCC
>Mature Secondary Structure
MRESVMASSPDVVEYICFQLRHAGDISFRKMFGDYGLYCGRTFFGLVCDNQLYVKITEPG
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHEEECCEEEEEECCCC
LKMFPQQEQGCPYPGARPHFLVTELDDDRILSSLVRETCSVLAVPSVLEGKKKKASGEKR
CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHCCCCHHCCCCCC
SRRP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA