Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736604

Identifier: 187736604

GI number: 187736604

Start: 2591830

End: 2592507

Strand: Reverse

Name: 187736604

Synonym: Amuc_2126

Alternate gene names: NA

Gene position: 2592507-2591830 (Counterclockwise)

Preceding gene: 187736612

Following gene: 187736596

Centisome position: 97.31

GC content: 52.06

Gene sequence:

>678_bases
ATGGTTCAGGGGGCAACCGTCCTTACTTTGGATTCCAGTGAATTGCAGGCAGCAGGCGGATCATATACCCTGACGGAGGG
TATAAACTCCGGTTACGGCAATTTCTCCGTGACCATGGCCCTGGACGCTCAGGCTTTCCAAAACGCCATTCTGGCAGGTA
ACGTCAAGGCGAATATTTTTTCCGCCAATAATAATATGATCGGCCTGGGCCTCAACTACGTTTCTTCAGGAACTCCCACG
GCGGGCATTTATGGTTCCTGGCAAGGAGAGAACTACAACCGCACGATTACTTCTGTCAACGGTTCTGAACTCAATTTGAA
TACGGGATTGAAGGAATTGTTCACCGAAAACAGCTATGAATCCGCCGCCATCACTTATCAGATTACCAGCACCGGAACCT
GGACTTACCTGACCCTGGTTGATTCCGAAGGAACCGCCACCACTTATGGTGGTCAGGATTCAGGGTTGAAAGCGAGCGGG
TTCGGAGCCCTGACTTCATTTACCTATGGCACGGATTACGTCAAATACCTTGTCGTGGATAATACCACGTTGCAGGCTAA
TGCTTCCCAGGAAGCCAATCTTAATGCCATTGCGGCGGCTGCCGTTCCCGAACCGGCCACGGCATCCCTCAGCCTGATTG
GTCTGGCTGCCCTCATGATGCGTCGCAGACGTGCCTGA

Upstream 100 bases:

>100_bases
TACCGCACTGGGAGAGCGCGTCGCTCTTTTCTTTTCAACCTAGAACAGTCAAATGAAGAAAACATTATTTTTGCTTTCTT
GTGTAGTAGCTTCTTCCCTC

Downstream 100 bases:

>100_bases
GCCGGGGAGTCCAATTGCTGTTTTACAGGAGGCGGGAAAGATCCCGCCTCCTCTTTTATTATCATCAGGAGGGAAGTATC
CGTATCCGTCAAATCATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVQGATVLTLDSSELQAAGGSYTLTEGINSGYGNFSVTMALDAQAFQNAILAGNVKANIFSANNNMIGLGLNYVSSGTPT
AGIYGSWQGENYNRTITSVNGSELNLNTGLKELFTENSYESAAITYQITSTGTWTYLTLVDSEGTATTYGGQDSGLKASG
FGALTSFTYGTDYVKYLVVDNTTLQANASQEANLNAIAAAAVPEPATASLSLIGLAALMMRRRRA

Sequences:

>Translated_225_residues
MVQGATVLTLDSSELQAAGGSYTLTEGINSGYGNFSVTMALDAQAFQNAILAGNVKANIFSANNNMIGLGLNYVSSGTPT
AGIYGSWQGENYNRTITSVNGSELNLNTGLKELFTENSYESAAITYQITSTGTWTYLTLVDSEGTATTYGGQDSGLKASG
FGALTSFTYGTDYVKYLVVDNTTLQANASQEANLNAIAAAAVPEPATASLSLIGLAALMMRRRRA
>Mature_225_residues
MVQGATVLTLDSSELQAAGGSYTLTEGINSGYGNFSVTMALDAQAFQNAILAGNVKANIFSANNNMIGLGLNYVSSGTPT
AGIYGSWQGENYNRTITSVNGSELNLNTGLKELFTENSYESAAITYQITSTGTWTYLTLVDSEGTATTYGGQDSGLKASG
FGALTSFTYGTDYVKYLVVDNTTLQANASQEANLNAIAAAAVPEPATASLSLIGLAALMMRRRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23488; Mature: 23488

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQGATVLTLDSSELQAAGGSYTLTEGINSGYGNFSVTMALDAQAFQNAILAGNVKANIF
CCCCCEEEEECCHHHHHCCCCEEEECCCCCCCCCEEEEEEECHHHHHCEEEECCEEEEEE
SANNNMIGLGLNYVSSGTPTAGIYGSWQGENYNRTITSVNGSELNLNTGLKELFTENSYE
ECCCCEEEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCCEEEECCCHHHHHCCCCCC
SAAITYQITSTGTWTYLTLVDSEGTATTYGGQDSGLKASGFGALTSFTYGTDYVKYLVVD
CEEEEEEEECCCCEEEEEEEECCCCEEECCCCCCCCEECCCCCEEEEECCCCEEEEEEEE
NTTLQANASQEANLNAIAAAAVPEPATASLSLIGLAALMMRRRRA
CCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVQGATVLTLDSSELQAAGGSYTLTEGINSGYGNFSVTMALDAQAFQNAILAGNVKANIF
CCCCCEEEEECCHHHHHCCCCEEEECCCCCCCCCEEEEEEECHHHHHCEEEECCEEEEEE
SANNNMIGLGLNYVSSGTPTAGIYGSWQGENYNRTITSVNGSELNLNTGLKELFTENSYE
ECCCCEEEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCCEEEECCCHHHHHCCCCCC
SAAITYQITSTGTWTYLTLVDSEGTATTYGGQDSGLKASGFGALTSFTYGTDYVKYLVVD
CEEEEEEEECCCCEEEEEEEECCCCEEECCCCCCCCEECCCCCEEEEECCCCEEEEEEEE
NTTLQANASQEANLNAIAAAAVPEPATASLSLIGLAALMMRRRRA
CCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA