| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736612
Identifier: 187736612
GI number: 187736612
Start: 2600936
End: 2601337
Strand: Reverse
Name: 187736612
Synonym: Amuc_2134
Alternate gene names: NA
Gene position: 2601337-2600936 (Counterclockwise)
Preceding gene: 187736614
Following gene: 187736604
Centisome position: 97.64
GC content: 52.49
Gene sequence:
>402_bases ATGGACGAAGAACAACAAATCATCCAGGAACCGGTTCAGGAGCCCGCCCCTGAGAAACAATCGGATAAAACGCAGGCTAT CCTGACGGCGGTTTCTCCGCTGGTGGCCGTCTTTTTCGGAGGCTCCGCCGGCGTGAACATTATTCCGCCCCTGATCTGCT GGCTGGTCTGGAAGGATGCCAACCCTCTGGTGGACAAAGTAGGAAAGAATATTCTGAATGCCCAGATTTCCTGGGCGATT TATACGGTTGCGGCCTGTCTTTCATGTTTGATCCTGATCGGGTTCGTGCTCGCCCCTGTGGTGGTTATCGCCTGGATCGT TTTCTCCATTATCGCTGCCGTCAAGGCGGCGAACGGGAATTACGATTATGTGGCTCCCTTCACGATTAAATTCCTGAAAT AA
Upstream 100 bases:
>100_bases TTGACTACGGGGAGGAATATGTAAAAAAGGTCTCATCAAGGCGGAATGAAACGGAAAAGGTTTCCGTTCTCCTTCATCCG CTTTCCATCTCTTTATTTTT
Downstream 100 bases:
>100_bases CGTTTTTCCGTTTTTCAGCAGATCAACAGATGAAAAAACCGCCGGTACGGAATGCCGGCGGTTTTTTGATGAGGGCTTTC CATTTGCCGGAGGGGTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDANPLVDKVGKNILNAQISWAI YTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGNYDYVAPFTIKFLK
Sequences:
>Translated_133_residues MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDANPLVDKVGKNILNAQISWAI YTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGNYDYVAPFTIKFLK >Mature_133_residues MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDANPLVDKVGKNILNAQISWAI YTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGNYDYVAPFTIKFLK
Specific function: Unknown
COG id: COG3296
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14397; Mature: 14397
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDA CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC NPLVDKVGKNILNAQISWAIYTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YDYVAPFTIKFLK CCEECCCEEEECC >Mature Secondary Structure MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDA CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC NPLVDKVGKNILNAQISWAIYTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YDYVAPFTIKFLK CCEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA