Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736612

Identifier: 187736612

GI number: 187736612

Start: 2600936

End: 2601337

Strand: Reverse

Name: 187736612

Synonym: Amuc_2134

Alternate gene names: NA

Gene position: 2601337-2600936 (Counterclockwise)

Preceding gene: 187736614

Following gene: 187736604

Centisome position: 97.64

GC content: 52.49

Gene sequence:

>402_bases
ATGGACGAAGAACAACAAATCATCCAGGAACCGGTTCAGGAGCCCGCCCCTGAGAAACAATCGGATAAAACGCAGGCTAT
CCTGACGGCGGTTTCTCCGCTGGTGGCCGTCTTTTTCGGAGGCTCCGCCGGCGTGAACATTATTCCGCCCCTGATCTGCT
GGCTGGTCTGGAAGGATGCCAACCCTCTGGTGGACAAAGTAGGAAAGAATATTCTGAATGCCCAGATTTCCTGGGCGATT
TATACGGTTGCGGCCTGTCTTTCATGTTTGATCCTGATCGGGTTCGTGCTCGCCCCTGTGGTGGTTATCGCCTGGATCGT
TTTCTCCATTATCGCTGCCGTCAAGGCGGCGAACGGGAATTACGATTATGTGGCTCCCTTCACGATTAAATTCCTGAAAT
AA

Upstream 100 bases:

>100_bases
TTGACTACGGGGAGGAATATGTAAAAAAGGTCTCATCAAGGCGGAATGAAACGGAAAAGGTTTCCGTTCTCCTTCATCCG
CTTTCCATCTCTTTATTTTT

Downstream 100 bases:

>100_bases
CGTTTTTCCGTTTTTCAGCAGATCAACAGATGAAAAAACCGCCGGTACGGAATGCCGGCGGTTTTTTGATGAGGGCTTTC
CATTTGCCGGAGGGGTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDANPLVDKVGKNILNAQISWAI
YTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGNYDYVAPFTIKFLK

Sequences:

>Translated_133_residues
MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDANPLVDKVGKNILNAQISWAI
YTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGNYDYVAPFTIKFLK
>Mature_133_residues
MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDANPLVDKVGKNILNAQISWAI
YTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGNYDYVAPFTIKFLK

Specific function: Unknown

COG id: COG3296

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14397; Mature: 14397

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
NPLVDKVGKNILNAQISWAIYTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YDYVAPFTIKFLK
CCEECCCEEEECC
>Mature Secondary Structure
MDEEQQIIQEPVQEPAPEKQSDKTQAILTAVSPLVAVFFGGSAGVNIIPPLICWLVWKDA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
NPLVDKVGKNILNAQISWAIYTVAACLSCLILIGFVLAPVVVIAWIVFSIIAAVKAANGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YDYVAPFTIKFLK
CCEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA