| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736598
Identifier: 187736598
GI number: 187736598
Start: 2582566
End: 2583468
Strand: Direct
Name: 187736598
Synonym: Amuc_2120
Alternate gene names: NA
Gene position: 2582566-2583468 (Clockwise)
Preceding gene: 187736597
Following gene: 187736599
Centisome position: 96.94
GC content: 59.58
Gene sequence:
>903_bases ATGAAATACCTGAATCACAACCTGCTCAGCCGCCTGGGGAACCTTCCCCTGGAAGCGCGCCACAGCATGACGGGGAACGT ATCCGGCCGCCATAGAAGCGCCAGCCGCGGCTCCTCCGTGGAATTTGCGGAATACCGCAAATACGTGGCCGGAGACGATA CACGCCGTCTGGACTGGAAAGCGTATGCACGGTCGGACAGGTATTACATCAAGGAGTTTGAAGCGGATACCAACCTGCGC GCCTACATCGTCATGGATCTTTCCGGCTCCATGAATTATCATCCGGAGCAGGTGGAGACCAAGTATATGCGCGCGTGCAG GCTGGCGGCCAACCTGGCTTACATTGCCATCCGGCAGGGAGACGCGGTGGGACTGAGTTTTGCCCGGCAGACGAAGGACG GCGCCGCGCTGCACATCCCCGCCTCCCGCCGCCCCGCCCACCTGAACGTGCTCATCAGCCAGATGGACACGCATTCTCCG CAGGGGGAGACCGTCCTTCCCGATACCCTGCATGAACTGGCGGAACGCGTCGGCCGCCGCGCCCTGGTGTTGATTTTCTC AGACCTGTTCACAGATACGGCGGAGCTTAAAAACGCCCTCCGCCACCTCCATTTCCGCAAGCATGACATAGCCGTATTCC ATCTGGTGGACCAGTTGGAAATAGATTTTGACTTTGACCGCCCCATCCGCTTCGTGGACATGGAAGGCGGCGGCTCCCTG ATTACGGAGCCGGACCTTATCGCGGACGAGTACCGGGCTATCGTGGCCAGCTATCTGGAAGAAACGCGCCGGATCTGCAC GGATATCAATGCGGACTACCGCCTGGTCAGAACCGGAGATTCCCTGGAAGACGTGCTGACCGGCTTCCTGATGGGACGTC AGAAAAAGAAGGCGGCCGGATAA
Upstream 100 bases:
>100_bases CCGCGGAATCCCAGGGCATCACGCCCCGTAAGGCCGTGGCGCGCCTGGCGGCGGAAATCTGACCGCCGTCCCGGCATCAT CAATCCCCTTTCCCTACCCC
Downstream 100 bases:
>100_bases ATGCCCGGCTGTCTCACGGAACGGTTGATTGCTCCGCGGAACGGATGCAGGATGCACCCAGACGCTCCCCGGATTGCAGG AAGCGTCTGTTTTTCATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKYLNHNLLSRLGNLPLEARHSMTGNVSGRHRSASRGSSVEFAEYRKYVAGDDTRRLDWKAYARSDRYYIKEFEADTNLR AYIVMDLSGSMNYHPEQVETKYMRACRLAANLAYIAIRQGDAVGLSFARQTKDGAALHIPASRRPAHLNVLISQMDTHSP QGETVLPDTLHELAERVGRRALVLIFSDLFTDTAELKNALRHLHFRKHDIAVFHLVDQLEIDFDFDRPIRFVDMEGGGSL ITEPDLIADEYRAIVASYLEETRRICTDINADYRLVRTGDSLEDVLTGFLMGRQKKKAAG
Sequences:
>Translated_300_residues MKYLNHNLLSRLGNLPLEARHSMTGNVSGRHRSASRGSSVEFAEYRKYVAGDDTRRLDWKAYARSDRYYIKEFEADTNLR AYIVMDLSGSMNYHPEQVETKYMRACRLAANLAYIAIRQGDAVGLSFARQTKDGAALHIPASRRPAHLNVLISQMDTHSP QGETVLPDTLHELAERVGRRALVLIFSDLFTDTAELKNALRHLHFRKHDIAVFHLVDQLEIDFDFDRPIRFVDMEGGGSL ITEPDLIADEYRAIVASYLEETRRICTDINADYRLVRTGDSLEDVLTGFLMGRQKKKAAG >Mature_300_residues MKYLNHNLLSRLGNLPLEARHSMTGNVSGRHRSASRGSSVEFAEYRKYVAGDDTRRLDWKAYARSDRYYIKEFEADTNLR AYIVMDLSGSMNYHPEQVETKYMRACRLAANLAYIAIRQGDAVGLSFARQTKDGAALHIPASRRPAHLNVLISQMDTHSP QGETVLPDTLHELAERVGRRALVLIFSDLFTDTAELKNALRHLHFRKHDIAVFHLVDQLEIDFDFDRPIRFVDMEGGGSL ITEPDLIADEYRAIVASYLEETRRICTDINADYRLVRTGDSLEDVLTGFLMGRQKKKAAG
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34104; Mature: 34104
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLNHNLLSRLGNLPLEARHSMTGNVSGRHRSASRGSSVEFAEYRKYVAGDDTRRLDWK CCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHH AYARSDRYYIKEFEADTNLRAYIVMDLSGSMNYHPEQVETKYMRACRLAANLAYIAIRQG HHHCCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECC DAVGLSFARQTKDGAALHIPASRRPAHLNVLISQMDTHSPQGETVLPDTLHELAERVGRR CCCCHHHHHCCCCCCEEECCCCCCCCCHHHEEEHHHCCCCCCCEECHHHHHHHHHHHCCC ALVLIFSDLFTDTAELKNALRHLHFRKHDIAVFHLVDQLEIDFDFDRPIRFVDMEGGGSL EEEHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEEHHEEEECCCCCEEEEEECCCCCC ITEPDLIADEYRAIVASYLEETRRICTDINADYRLVRTGDSLEDVLTGFLMGRQKKKAAG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MKYLNHNLLSRLGNLPLEARHSMTGNVSGRHRSASRGSSVEFAEYRKYVAGDDTRRLDWK CCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHH AYARSDRYYIKEFEADTNLRAYIVMDLSGSMNYHPEQVETKYMRACRLAANLAYIAIRQG HHHCCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECC DAVGLSFARQTKDGAALHIPASRRPAHLNVLISQMDTHSPQGETVLPDTLHELAERVGRR CCCCHHHHHCCCCCCEEECCCCCCCCCHHHEEEHHHCCCCCCCEECHHHHHHHHHHHCCC ALVLIFSDLFTDTAELKNALRHLHFRKHDIAVFHLVDQLEIDFDFDRPIRFVDMEGGGSL EEEHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEEHHEEEECCCCCEEEEEECCCCCC ITEPDLIADEYRAIVASYLEETRRICTDINADYRLVRTGDSLEDVLTGFLMGRQKKKAAG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA