| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is gutB [H]
Identifier: 187736594
GI number: 187736594
Start: 2578670
End: 2579791
Strand: Direct
Name: gutB [H]
Synonym: Amuc_2116
Alternate gene names: 187736594
Gene position: 2578670-2579791 (Clockwise)
Preceding gene: 187736591
Following gene: 187736597
Centisome position: 96.79
GC content: 58.38
Gene sequence:
>1122_bases ATGCAACAAACCGCACGCGCCGCTGTCCTGACAGCACCAAAGACATTTGAAATCCGTGAATATCCCATTCCCGCCATCGG AGACGATGAAATGCTGATCAAGGTGGAAGCCTGCGGCGTTTGCGGAACGGACGGCCACGAATACAACCGGGACCCCTTCG GCCTCTGCCCCGTGGTCCTGGGCCATGAAGGCACCGGGGAAATCGTCGCCATGGGCAGGAATATCACTAAAGACACCGCC GGAAATCCCGTAGCGCTGGGGGACAAGATCGTCACCTGCATCATTCCCTGCGGCACCTGTGACGCCTGCCTGAATACTCC GGCCCGCACCAACCTGTGCGAAAATGTGGGCGTGTATGGCCTGATGCCTGACGACGACGTGCATCTGAACGGCTACTTCG GGGAGTACCTCGTCATCCGCAAGGGCTCCACATTTTTCAATGTTTCCGGCATGACGCTGGACCAGCGCATTCTGGTGGAA CCCGCCGCAGTGGTGGTCCATTCCCTGGAACGCGCCAAGTCCACCGGGCTCCTCAAGTTCAATTCTGTGGTTCTCGTGCA GGGCTGCGGCCCCATCGGCCTTCTTCAAATCGCCACGCTGCGCACGCTGGGCATTGAAACCATCATCGCTGTGGACGGCA ATGACTCCCGCCTGGAACTGGCCAGGGAAATGGGAGCCTCCCGCACGTATAACTTCACCCGGTACGCGGATCTGAACGAA CTGCTGGATGCCGTGAAAAAGGACAACGGCGGCCGCCTGGCGGACTTCGTCTTTCAGTGCACGGGCGTAGGCAAGGCCGG GGCCAACGCCTGGAAGTTCGTGAAGCGCGGCGGCGGCCTGTGCGAAGTGGGCTTTTTCATGGATGGAGGGGAAAGCGTTA TCAACCACCATTACGACCTCTGCAACAAGGAGGTAACCGCCGTAGGCTCCTGGGTGTACTCCCCGCAGGACTACCCGACC ACATTCGACTTTCTGAAGCGAGCCTACGGCATCGGCCTGCCGCTGACCAAGCTGATCTCCCACCGCTTCAAGCTGGATGA AATCGCGGAAGCCCTGGAAACCAACGTCCAGATGAAAGGCATCAAGATTGCCGTCATTTGTAATTGCAGTAAAAATATAT AA
Upstream 100 bases:
>100_bases GACCGGGAAGGAACTTCCCCCCGGTTCCAACAGGCGGAGTTCCTTTCATCACTATTTGTTCTTGAAGAATCCGGGCGGCA AAGGATAGTGTAAGGGCATC
Downstream 100 bases:
>100_bases GTAAAAAATAACTCCATAAGATAATCCATGGAAAATATTTTTCTATTTATGTTGCTTTTTCCCTTTATTTAAAAATATCA AATAAAAAATAACAAGAACC
Product: Alcohol dehydrogenase zinc-binding domain protein
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MQQTARAAVLTAPKTFEIREYPIPAIGDDEMLIKVEACGVCGTDGHEYNRDPFGLCPVVLGHEGTGEIVAMGRNITKDTA GNPVALGDKIVTCIIPCGTCDACLNTPARTNLCENVGVYGLMPDDDVHLNGYFGEYLVIRKGSTFFNVSGMTLDQRILVE PAAVVVHSLERAKSTGLLKFNSVVLVQGCGPIGLLQIATLRTLGIETIIAVDGNDSRLELAREMGASRTYNFTRYADLNE LLDAVKKDNGGRLADFVFQCTGVGKAGANAWKFVKRGGGLCEVGFFMDGGESVINHHYDLCNKEVTAVGSWVYSPQDYPT TFDFLKRAYGIGLPLTKLISHRFKLDEIAEALETNVQMKGIKIAVICNCSKNI
Sequences:
>Translated_373_residues MQQTARAAVLTAPKTFEIREYPIPAIGDDEMLIKVEACGVCGTDGHEYNRDPFGLCPVVLGHEGTGEIVAMGRNITKDTA GNPVALGDKIVTCIIPCGTCDACLNTPARTNLCENVGVYGLMPDDDVHLNGYFGEYLVIRKGSTFFNVSGMTLDQRILVE PAAVVVHSLERAKSTGLLKFNSVVLVQGCGPIGLLQIATLRTLGIETIIAVDGNDSRLELAREMGASRTYNFTRYADLNE LLDAVKKDNGGRLADFVFQCTGVGKAGANAWKFVKRGGGLCEVGFFMDGGESVINHHYDLCNKEVTAVGSWVYSPQDYPT TFDFLKRAYGIGLPLTKLISHRFKLDEIAEALETNVQMKGIKIAVICNCSKNI >Mature_373_residues MQQTARAAVLTAPKTFEIREYPIPAIGDDEMLIKVEACGVCGTDGHEYNRDPFGLCPVVLGHEGTGEIVAMGRNITKDTA GNPVALGDKIVTCIIPCGTCDACLNTPARTNLCENVGVYGLMPDDDVHLNGYFGEYLVIRKGSTFFNVSGMTLDQRILVE PAAVVVHSLERAKSTGLLKFNSVVLVQGCGPIGLLQIATLRTLGIETIIAVDGNDSRLELAREMGASRTYNFTRYADLNE LLDAVKKDNGGRLADFVFQCTGVGKAGANAWKFVKRGGGLCEVGFFMDGGESVINHHYDLCNKEVTAVGSWVYSPQDYPT TFDFLKRAYGIGLPLTKLISHRFKLDEIAEALETNVQMKGIKIAVICNCSKNI
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=367, Percent_Identity=25.8855585831063, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI71565154, Length=380, Percent_Identity=28.6842105263158, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI4501939, Length=371, Percent_Identity=26.6846361185984, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI156523966, Length=371, Percent_Identity=26.6846361185984, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI4501929, Length=273, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI71743840, Length=275, Percent_Identity=25.4545454545455, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI262073058, Length=275, Percent_Identity=25.4545454545455, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI226510992, Length=354, Percent_Identity=30.7909604519774, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1788073, Length=358, Percent_Identity=29.608938547486, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1790045, Length=356, Percent_Identity=27.8089887640449, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1787863, Length=349, Percent_Identity=26.0744985673352, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1788407, Length=341, Percent_Identity=26.099706744868, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI1790718, Length=359, Percent_Identity=25.9052924791086, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1786552, Length=379, Percent_Identity=28.7598944591029, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082125, Length=376, Percent_Identity=24.2021276595745, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1786825, Length=292, Percent_Identity=26.3698630136986, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562876, Length=375, Percent_Identity=27.4666666666667, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17562878, Length=371, Percent_Identity=25.8760107816712, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25146526, Length=374, Percent_Identity=26.7379679144385, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71997431, Length=374, Percent_Identity=26.2032085561497, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17565904, Length=346, Percent_Identity=26.878612716763, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562584, Length=319, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562582, Length=143, Percent_Identity=34.2657342657343, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71988145, Length=213, Percent_Identity=27.6995305164319, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322619, Length=375, Percent_Identity=29.6, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6319955, Length=375, Percent_Identity=29.3333333333333, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323099, Length=355, Percent_Identity=28.169014084507, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6319258, Length=269, Percent_Identity=30.4832713754647, Blast_Score=100, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6320033, Length=367, Percent_Identity=27.5204359673025, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6319257, Length=330, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6324486, Length=315, Percent_Identity=25.3968253968254, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323961, Length=315, Percent_Identity=24.4444444444444, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI17137530, Length=374, Percent_Identity=28.0748663101604, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI17737897, Length=367, Percent_Identity=27.7929155313352, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737895, Length=376, Percent_Identity=26.5957446808511, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 40385; Mature: 40385
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQTARAAVLTAPKTFEIREYPIPAIGDDEMLIKVEACGVCGTDGHEYNRDPFGLCPVVL CCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEE GHEGTGEIVAMGRNITKDTAGNPVALGDKIVTCIIPCGTCDACLNTPARTNLCENVGVYG CCCCCCCEEEECCCCCCCCCCCCEEECCEEEEEEEECCCCHHHHCCCHHHHHHHHCCEEE LMPDDDVHLNGYFGEYLVIRKGSTFFNVSGMTLDQRILVEPAAVVVHSLERAKSTGLLKF ECCCCCEEEEEEECCEEEEECCCCEEEECCCEECCEEECCHHHHHHHHHHHHHCCCEEEE NSVVLVQGCGPIGLLQIATLRTLGIETIIAVDGNDSRLELAREMGASRTYNFTRYADLNE CCEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEEECCHHH LLDAVKKDNGGRLADFVFQCTGVGKAGANAWKFVKRGGGLCEVGFFMDGGESVINHHYDL HHHHHHCCCCCCHHHHHEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHH CNKEVTAVGSWVYSPQDYPTTFDFLKRAYGIGLPLTKLISHRFKLDEIAEALETNVQMKG CCCHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCEECC IKIAVICNCSKNI EEEEEEECCCCCC >Mature Secondary Structure MQQTARAAVLTAPKTFEIREYPIPAIGDDEMLIKVEACGVCGTDGHEYNRDPFGLCPVVL CCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEE GHEGTGEIVAMGRNITKDTAGNPVALGDKIVTCIIPCGTCDACLNTPARTNLCENVGVYG CCCCCCCEEEECCCCCCCCCCCCEEECCEEEEEEEECCCCHHHHCCCHHHHHHHHCCEEE LMPDDDVHLNGYFGEYLVIRKGSTFFNVSGMTLDQRILVEPAAVVVHSLERAKSTGLLKF ECCCCCEEEEEEECCEEEEECCCCEEEECCCEECCEEECCHHHHHHHHHHHHHCCCEEEE NSVVLVQGCGPIGLLQIATLRTLGIETIIAVDGNDSRLELAREMGASRTYNFTRYADLNE CCEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEEECCHHH LLDAVKKDNGGRLADFVFQCTGVGKAGANAWKFVKRGGGLCEVGFFMDGGESVINHHYDL HHHHHHCCCCCCHHHHHEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHH CNKEVTAVGSWVYSPQDYPTTFDFLKRAYGIGLPLTKLISHRFKLDEIAEALETNVQMKG CCCHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCEECC IKIAVICNCSKNI EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1460002; 9384377; 8195086 [H]