| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736578
Identifier: 187736578
GI number: 187736578
Start: 2553762
End: 2554910
Strand: Direct
Name: 187736578
Synonym: Amuc_2100
Alternate gene names: NA
Gene position: 2553762-2554910 (Clockwise)
Preceding gene: 187736577
Following gene: 187736579
Centisome position: 95.86
GC content: 57.09
Gene sequence:
>1149_bases ATGCCCCTGTCCGCCGTTTTCCACACTTCCTCCCTTCAGAAGCAAGTGGCCGCCCTGAGCGACGCATTCGCCATCGCAGG AGAATTCCTCCATTGCGACGTCATTAACAGCGGCCATATCAACATGACCTTCCGGGCCACCTACAGGAAGCCGGACGGCA CCACCCGCCGCTACATCTTCCAGCGCGTGAACGATGCCGTGTTCCCATGCCCCAGGGATGTCATGCACAACGTGGAAAAG GTGACCAACCATATCCGCTGGAAAATGTTCCGGGTGCTGAAAACGCCCTTCCGCCAGACGCTGAACCTGTACTCCGCGCG GGGCGGCCGCAAATACCTGGAAATTCCCGGTTCCGGCTTCTGGCGCTGCTACAACTGCATAGAAAACACCCACACGTTCG ACGTAGCGGACCATCCCCGCCAGGCTTACGAAGCAGCCCGCGCTTTCGGCGCTTTCCAACAGCTCCTGTGTGACATGAAT CCGGAGGACATCCATGAAACCATTCCGTTCTTCCACCATACCCGCAGGCGCTTTGACCATTTGGAAAAAGCCGCGGCAGC AGACTCCCACGGACGTCTGAATACCTGCCGCAAGGAGCTGGACTTCATCCGCCGCCGTGAACGTTATGTGGACGTGCTGC TGGATCTCCAGGAACGGGGGGAGCTCCCCGTCAGAATCGTCCACAACGACACGAAAATCAACAACGTGATGCTGGACAGG GAGACGGACAAGGCTGTCTGCGTCATTGACCTGGACACCGTCATGCCCGGGAGCGTCCTGTACGACTTCGGAGACATGGT GCGCACCATGACCTCCCCTGCGGCGGAAGATGAAGAAAATCTGGATAAAACCTTCCTGCGCATGCCCATGTTCGAGGCCG TCGTCAAGGGATACCTGGAGGCCTCCAGAGAATTCATCACGCCGCAGGAAGTCTCCAAACTCGCTTTTTCCGGTCTGCTT ATCACGCTGGAAACGGGAATCCGCTTCCTGACGGACTACCTGGAAGGGGACGTTTATTTCAAAACGAAAAAAGAACGGCA CAATCTGCACCGTGCCCGCACCCAGCTCAGGCTGGTGGAAAGCATGGAAGAGCAAATGCCTGAAATGGAAGAATGCGTCC GGAAATGCTTCCAGACTGTTAACGGCTGA
Upstream 100 bases:
>100_bases GGAGTTGCCTACACCTTCTAACAATCTGACTGTCATTCACTCAACCAACGCAAGCTCCGGCATGTGCCATCAATCATGCC GGAGCTTTTCTTAACTCCCC
Downstream 100 bases:
>100_bases GAGGGCATGACCGGCATTACCCCAATTTTATGATAGTACCGGAACGCGGGCTGGTGCTATACTGCGAGGCATGTTAAAAA ATATTTCTCCCCTCATCAGC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Mucin-Desulfating Sulfatase; Desulfatase Possibly For Mucin; N-Acetylhexosamine-1-Kinase NahK; Phosphotransferase Family Protein; Phosphotransferase Family; Homoserine/Choline Kinase Family Protein; Desulfatase; Phosphotransferase
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MPLSAVFHTSSLQKQVAALSDAFAIAGEFLHCDVINSGHINMTFRATYRKPDGTTRRYIFQRVNDAVFPCPRDVMHNVEK VTNHIRWKMFRVLKTPFRQTLNLYSARGGRKYLEIPGSGFWRCYNCIENTHTFDVADHPRQAYEAARAFGAFQQLLCDMN PEDIHETIPFFHHTRRRFDHLEKAAAADSHGRLNTCRKELDFIRRRERYVDVLLDLQERGELPVRIVHNDTKINNVMLDR ETDKAVCVIDLDTVMPGSVLYDFGDMVRTMTSPAAEDEENLDKTFLRMPMFEAVVKGYLEASREFITPQEVSKLAFSGLL ITLETGIRFLTDYLEGDVYFKTKKERHNLHRARTQLRLVESMEEQMPEMEECVRKCFQTVNG
Sequences:
>Translated_382_residues MPLSAVFHTSSLQKQVAALSDAFAIAGEFLHCDVINSGHINMTFRATYRKPDGTTRRYIFQRVNDAVFPCPRDVMHNVEK VTNHIRWKMFRVLKTPFRQTLNLYSARGGRKYLEIPGSGFWRCYNCIENTHTFDVADHPRQAYEAARAFGAFQQLLCDMN PEDIHETIPFFHHTRRRFDHLEKAAAADSHGRLNTCRKELDFIRRRERYVDVLLDLQERGELPVRIVHNDTKINNVMLDR ETDKAVCVIDLDTVMPGSVLYDFGDMVRTMTSPAAEDEENLDKTFLRMPMFEAVVKGYLEASREFITPQEVSKLAFSGLL ITLETGIRFLTDYLEGDVYFKTKKERHNLHRARTQLRLVESMEEQMPEMEECVRKCFQTVNG >Mature_381_residues PLSAVFHTSSLQKQVAALSDAFAIAGEFLHCDVINSGHINMTFRATYRKPDGTTRRYIFQRVNDAVFPCPRDVMHNVEKV TNHIRWKMFRVLKTPFRQTLNLYSARGGRKYLEIPGSGFWRCYNCIENTHTFDVADHPRQAYEAARAFGAFQQLLCDMNP EDIHETIPFFHHTRRRFDHLEKAAAADSHGRLNTCRKELDFIRRRERYVDVLLDLQERGELPVRIVHNDTKINNVMLDRE TDKAVCVIDLDTVMPGSVLYDFGDMVRTMTSPAAEDEENLDKTFLRMPMFEAVVKGYLEASREFITPQEVSKLAFSGLLI TLETGIRFLTDYLEGDVYFKTKKERHNLHRARTQLRLVESMEEQMPEMEECVRKCFQTVNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44401; Mature: 44270
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSAVFHTSSLQKQVAALSDAFAIAGEFLHCDVINSGHINMTFRATYRKPDGTTRRYIF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEEEEECCCCHHHHHHH QRVNDAVFPCPRDVMHNVEKVTNHIRWKMFRVLKTPFRQTLNLYSARGGRKYLEIPGSGF HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH WRCYNCIENTHTFDVADHPRQAYEAARAFGAFQQLLCDMNPEDIHETIPFFHHTRRRFDH HHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LEKAAAADSHGRLNTCRKELDFIRRRERYVDVLLDLQERGELPVRIVHNDTKINNVMLDR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEC ETDKAVCVIDLDTVMPGSVLYDFGDMVRTMTSPAAEDEENLDKTFLRMPMFEAVVKGYLE CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASREFITPQEVSKLAFSGLLITLETGIRFLTDYLEGDVYFKTKKERHNLHRARTQLRLVE HHHHCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH SMEEQMPEMEECVRKCFQTVNG HHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure PLSAVFHTSSLQKQVAALSDAFAIAGEFLHCDVINSGHINMTFRATYRKPDGTTRRYIF CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEEEEECCCCHHHHHHH QRVNDAVFPCPRDVMHNVEKVTNHIRWKMFRVLKTPFRQTLNLYSARGGRKYLEIPGSGF HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH WRCYNCIENTHTFDVADHPRQAYEAARAFGAFQQLLCDMNPEDIHETIPFFHHTRRRFDH HHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LEKAAAADSHGRLNTCRKELDFIRRRERYVDVLLDLQERGELPVRIVHNDTKINNVMLDR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEC ETDKAVCVIDLDTVMPGSVLYDFGDMVRTMTSPAAEDEENLDKTFLRMPMFEAVVKGYLE CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASREFITPQEVSKLAFSGLLITLETGIRFLTDYLEGDVYFKTKKERHNLHRARTQLRLVE HHHHCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH SMEEQMPEMEECVRKCFQTVNG HHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA