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The map label for this gene is fucU [H]

Identifier: 187736579

GI number: 187736579

Start: 2554981

End: 2555400

Strand: Direct

Name: fucU [H]

Synonym: Amuc_2101

Alternate gene names: 187736579

Gene position: 2554981-2555400 (Clockwise)

Preceding gene: 187736578

Following gene: 187736580

Centisome position: 95.9

GC content: 55.71

Gene sequence:

>420_bases
ATGTTAAAAAATATTTCTCCCCTCATCAGCCCTTCCCTGCTGAAAATTCTTGCGGAAATGGGGCATGGCGACGAAATCGT
CTTTTCAGACGCCCACTTCCCCGGCCATACCTTCAACCCTACGGTGCTGAGGGCGGACGGCCTGGGGGCGGATGCCCTGC
TGGCTGCCGTCATTCCCCTCTTCGAACTGGATGCCTACGCAACGCCCGTCATCATGATGGCCCCGGTTCCGGGGGACTCT
CTGGACCCTGCGGTGGAAGCCAAATACCGCAAGGCGCTGAACTATGACGGGGAAATTGAGCAAATGGAGCGCTACGCTTT
TTATGAACGGGCCAAAAAGGCCTATGCCGTCGTCATTACCGGGGAAACGGCCAAATACGGCAACATCATCCTGAAAAAAG
GCGTTACCCCTCTTTCCTGA

Upstream 100 bases:

>100_bases
CGGAAATGCTTCCAGACTGTTAACGGCTGAGAGGGCATGACCGGCATTACCCCAATTTTATGATAGTACCGGAACGCGGG
CTGGTGCTATACTGCGAGGC

Downstream 100 bases:

>100_bases
CCATTGGCCGCCAGACAAACCTTCCATGCAGTACGATTTTGACGAAGTAATTGAGCGACGCGGCACCGGAGCCCTGAAAT
ATGAAGCGCTGCTTCCCCGC

Product: RbsD or FucU transport

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLKNISPLISPSLLKILAEMGHGDEIVFSDAHFPGHTFNPTVLRADGLGADALLAAVIPLFELDAYATPVIMMAPVPGDS
LDPAVEAKYRKALNYDGEIEQMERYAFYERAKKAYAVVITGETAKYGNIILKKGVTPLS

Sequences:

>Translated_139_residues
MLKNISPLISPSLLKILAEMGHGDEIVFSDAHFPGHTFNPTVLRADGLGADALLAAVIPLFELDAYATPVIMMAPVPGDS
LDPAVEAKYRKALNYDGEIEQMERYAFYERAKKAYAVVITGETAKYGNIILKKGVTPLS
>Mature_139_residues
MLKNISPLISPSLLKILAEMGHGDEIVFSDAHFPGHTFNPTVLRADGLGADALLAAVIPLFELDAYATPVIMMAPVPGDS
LDPAVEAKYRKALNYDGEIEQMERYAFYERAKKAYAVVITGETAKYGNIILKKGVTPLS

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=148, Percent_Identity=48.6486486486487, Blast_Score=122, Evalue=1e-28,
Organism=Homo sapiens, GI148596951, Length=130, Percent_Identity=46.1538461538462, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1789169, Length=140, Percent_Identity=67.8571428571429, Blast_Score=197, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15081; Mature: 15081

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNISPLISPSLLKILAEMGHGDEIVFSDAHFPGHTFNPTVLRADGLGADALLAAVIPL
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
FELDAYATPVIMMAPVPGDSLDPAVEAKYRKALNYDGEIEQMERYAFYERAKKAYAVVIT
HHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEE
GETAKYGNIILKKGVTPLS
CCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MLKNISPLISPSLLKILAEMGHGDEIVFSDAHFPGHTFNPTVLRADGLGADALLAAVIPL
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
FELDAYATPVIMMAPVPGDSLDPAVEAKYRKALNYDGEIEQMERYAFYERAKKAYAVVIT
HHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEE
GETAKYGNIILKKGVTPLS
CCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA