| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736575
Identifier: 187736575
GI number: 187736575
Start: 2549302
End: 2550306
Strand: Direct
Name: 187736575
Synonym: Amuc_2097
Alternate gene names: NA
Gene position: 2549302-2550306 (Clockwise)
Preceding gene: 187736574
Following gene: 187736576
Centisome position: 95.69
GC content: 49.75
Gene sequence:
>1005_bases ATGAATATGCTGAATCTCCTGAAAAAAATTTCCAACCGTCTCAATGCCATATGTTACACGCGTTCCAGCCGTTATAAACT AAGGTATCTTTATTCCTACGACCGTAAAAGATTTATCCGCCATGCAGGCTCCCTTCACCATGAGGAAGAAGAACAGAAAC TGGCATCTGTCATCATGGCCTACCATGTATTGGAAAAAGGATTAAGCATGCCTGAAAGACGTCTGGGATTTGGACATGAT GCCGTCCTGAACCTCATCAGTCTGATAAGGGATTATTCAGAAAAGTTCCCTCAAAATGATCAAATCCTGCATGCCATCTC CGTCTTGGACGCTTACCGCGAAATGCACAGAAAAGAAAACTTCAGCCTCCGTCCGGATCTCCAGCAGGCGCTGGACAGCC TGCTGGCGGACTTCCCCCCTGCGGTCAAGGAAGACGGTCAGATAGAAATGACCAGGGAACAATATTATGCCCATTTGGAA TCCTCCTTTCCCGAATTTTCGGCATCCCGCCATTCCGTGCGTCACTTCAATGGCCCGGTTTCACTGGAACAAATAGAACA GGCCGTATCCCTTGCCCGCAATGCCCCATCCGCCTGCAACAGGCAGCATGCCCGCGTCCATTGCATCTGTGACAAGGAAA CCCGGAAAAAAGTGCTTTCCCTCCAGAATGGAAACAGGGGATTCGGTCATTTGGCTGATAAGCTGCTCATTATTACCGCG GATCTCCACGACATCCGCTGGGAGGAAGAAAGGAACGACCTGTACACTAACGCAGGCATCTTTCTGATGAATCTCTGTTA TGCCCTTCATGCCAACAAGGTAGCCCACTGCCTCCTGAACTGGTCCGTATCCCCCTTTCAGGATATCCGGTTGAGGCAGC TGGTTTCCATTCCCGACCATGAAAGCATCATCTGCATTCTTGCCTGCGGTGATTGCCCGGAAAACTTCAGATTAGCGCCT TCGCCTCGTAAACCTGTCAGCCGGATATTAACCGTACACCGGTAA
Upstream 100 bases:
>100_bases GGAAAAAATACTGATTCTTCAACAGCTTAAAAAAAGAATTACCTCCCTTATCCACTCCTGATTTAAAAACCTTCCTTCCC ATTAACCGCAATCCACATCC
Downstream 100 bases:
>100_bases TTTCACCTGTGTTCACAGCATACAATTCCCTCTATCCGGTTACGCTGTAATTTTCATTTTCCCAGCTCTTTCATCTGAGC GATTTGTTGAAGATTAAAAG
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase-Like Protein; Nitroreductase Family Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MNMLNLLKKISNRLNAICYTRSSRYKLRYLYSYDRKRFIRHAGSLHHEEEEQKLASVIMAYHVLEKGLSMPERRLGFGHD AVLNLISLIRDYSEKFPQNDQILHAISVLDAYREMHRKENFSLRPDLQQALDSLLADFPPAVKEDGQIEMTREQYYAHLE SSFPEFSASRHSVRHFNGPVSLEQIEQAVSLARNAPSACNRQHARVHCICDKETRKKVLSLQNGNRGFGHLADKLLIITA DLHDIRWEEERNDLYTNAGIFLMNLCYALHANKVAHCLLNWSVSPFQDIRLRQLVSIPDHESIICILACGDCPENFRLAP SPRKPVSRILTVHR
Sequences:
>Translated_334_residues MNMLNLLKKISNRLNAICYTRSSRYKLRYLYSYDRKRFIRHAGSLHHEEEEQKLASVIMAYHVLEKGLSMPERRLGFGHD AVLNLISLIRDYSEKFPQNDQILHAISVLDAYREMHRKENFSLRPDLQQALDSLLADFPPAVKEDGQIEMTREQYYAHLE SSFPEFSASRHSVRHFNGPVSLEQIEQAVSLARNAPSACNRQHARVHCICDKETRKKVLSLQNGNRGFGHLADKLLIITA DLHDIRWEEERNDLYTNAGIFLMNLCYALHANKVAHCLLNWSVSPFQDIRLRQLVSIPDHESIICILACGDCPENFRLAP SPRKPVSRILTVHR >Mature_334_residues MNMLNLLKKISNRLNAICYTRSSRYKLRYLYSYDRKRFIRHAGSLHHEEEEQKLASVIMAYHVLEKGLSMPERRLGFGHD AVLNLISLIRDYSEKFPQNDQILHAISVLDAYREMHRKENFSLRPDLQQALDSLLADFPPAVKEDGQIEMTREQYYAHLE SSFPEFSASRHSVRHFNGPVSLEQIEQAVSLARNAPSACNRQHARVHCICDKETRKKVLSLQNGNRGFGHLADKLLIITA DLHDIRWEEERNDLYTNAGIFLMNLCYALHANKVAHCLLNWSVSPFQDIRLRQLVSIPDHESIICILACGDCPENFRLAP SPRKPVSRILTVHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38624; Mature: 38624
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMLNLLKKISNRLNAICYTRSSRYKLRYLYSYDRKRFIRHAGSLHHEEEEQKLASVIMA CCHHHHHHHHHHHHHEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YHVLEKGLSMPERRLGFGHDAVLNLISLIRDYSEKFPQNDQILHAISVLDAYREMHRKEN HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC FSLRPDLQQALDSLLADFPPAVKEDGQIEMTREQYYAHLESSFPEFSASRHSVRHFNGPV CCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHCCHHHHHHCCCCC SLEQIEQAVSLARNAPSACNRQHARVHCICDKETRKKVLSLQNGNRGFGHLADKLLIITA CHHHHHHHHHHHHCCCHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCHHHHHCEEEEEEE DLHDIRWEEERNDLYTNAGIFLMNLCYALHANKVAHCLLNWSVSPFQDIRLRQLVSIPDH CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC ESIICILACGDCPENFRLAPSPRKPVSRILTVHR CCEEEEEEECCCCCCCEECCCCCHHHHHHHHCCC >Mature Secondary Structure MNMLNLLKKISNRLNAICYTRSSRYKLRYLYSYDRKRFIRHAGSLHHEEEEQKLASVIMA CCHHHHHHHHHHHHHEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YHVLEKGLSMPERRLGFGHDAVLNLISLIRDYSEKFPQNDQILHAISVLDAYREMHRKEN HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC FSLRPDLQQALDSLLADFPPAVKEDGQIEMTREQYYAHLESSFPEFSASRHSVRHFNGPV CCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHCCHHHHHHCCCCC SLEQIEQAVSLARNAPSACNRQHARVHCICDKETRKKVLSLQNGNRGFGHLADKLLIITA CHHHHHHHHHHHHCCCHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCHHHHHCEEEEEEE DLHDIRWEEERNDLYTNAGIFLMNLCYALHANKVAHCLLNWSVSPFQDIRLRQLVSIPDH CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC ESIICILACGDCPENFRLAPSPRKPVSRILTVHR CCEEEEEEECCCCCCCEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA