| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736574
Identifier: 187736574
GI number: 187736574
Start: 2547727
End: 2549262
Strand: Direct
Name: 187736574
Synonym: Amuc_2096
Alternate gene names: NA
Gene position: 2547727-2549262 (Clockwise)
Preceding gene: 187736573
Following gene: 187736575
Centisome position: 95.63
GC content: 50.39
Gene sequence:
>1536_bases ATGGCTGAAGAAAACAGCAATAAGCGCATTGCCCGCAACACCATGCTGCTTTACACCCGTTCGCTGGTCAATCTGGTCAT CGGGCTGTACACGTCGCGCCTTACCCTGGACGCGCTGGGAATAGCGGATTACGGGATTTACAACGTCGTCGGCAGCCTGG TGGCTCTTTTCGGCCTGTTCAACGGCAGTCTGAATACGGCCATCAGCCGGTTCATCACTTACGAACTGGGAAGGAACAAT AACCAAAGGCTGAACAAGGTTTTTTCCTCTTCCCTGAGCATCCTCTTTATTTTTGCCCTGGTGATATTCATACTGGGGGA AACCGTGGGGCTGTGGGCGGTTAATTGCCGCATGGTTTTTCCCGCGGACCGAATGAATGCCGTCAACTGGGTCTATCAGA TTTCCCTGATGACATTCCTGGTAAGCCTGCTCAACGTGGCGTACACCGCAACGCTGACAGCGCATGAAAATTTCCGGGTG CTGGCGACAGTAGAAATCCTGTTGACAGGAGTCAAAGTAATATGCGTCATCCTGCTGTATTACGCACCTATGGACAGGCT GATTTATTTCGCCGGGTACTGTTTTCTGCTCACCCTGGCCTCAAGCGGCTTTTATGCCCTTTACTGCAGCAGGCATTACT CCAGCTGCCGCTACCGGGCCATTCTGGACAAGCCCTTTCTCAAGGAAATGGGAGCATTTTATTCGTGGAACCTTTTCGGC TCCATCGCCTGGCTGCTGAAGGGGGCCGGCATCAATGTGGTCATCAACCTCTTTTTCGGCGTACTCATCAATGCCGCTCA GGCCGTGGCGTCCCAGGTTTCATCCGGAGTAACCTCCCTGATGGGAAGTTTTTCCAGCGCCATGCAGCCGCAAATCACGA AAAGCTACGCGGCGGGAGACTACGAACACATGTGGAAACTGGTATTCAACGGAACGCGCTACAGTTTCTTTCTCCTGGCC GTCTTCATGCTTCCCCTGTGCTTCAACATTGATTTCATCCTCTCTCTCTGGCTCAAGGAAATCCCCGCATACACCAATAT CTTCGTGATTCTTCTCCTGGCTAACGTGCTGGCGGAAAGCTACTCCACTTATTTGATCACCGTTCTCCTGGCTACAGGGA AAATCGCCCTTTATCAGGCCAGCGTGGGAACAATTCTCCTGTTGAACGTCCCGTTAAGCTATCTGGTCTTTCAATGGGGG TTCCCTCCCGTTTCCTTCCTGATCGTCTCCATTGTCCTGACCATCATGGCGCTGATCATGAGGCTCTGGCTTCTGAAAAA AATGCTCCGCTTTTCCGTACTTTCCTTTCTTAAACAGGTGGTTCTCAAAACAGTTTCCGCCAGCCTGCTGATCTGCCTTG TCAACTGCGCCATTTATCTGCTGTTGCCTGACATGTATGGAAAACGCATTATTTTTCTTCTTTCAACGTCTCTCTTGTCC ATCCTTCTCACTTACCTGACAGGATTGAATAACCAGGAAAAAATACTGATTCTTCAACAGCTTAAAAAAAGAATTACCTC CCTTATCCACTCCTGA
Upstream 100 bases:
>100_bases CAGAGGATCCAATGGGAAGCCGTAGAAAACAGGCTGGAACAGCTTCGCGGCCACTCTGCCGAATTTCTGGAAAAGGCCAT TCAACAAAGCATTTGCCGCC
Downstream 100 bases:
>100_bases TTTAAAAACCTTCCTTCCCATTAACCGCAATCCACATCCATGAATATGCTGAATCTCCTGAAAAAAATTTCCAACCGTCT CAATGCCATATGTTACACGC
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MAEENSNKRIARNTMLLYTRSLVNLVIGLYTSRLTLDALGIADYGIYNVVGSLVALFGLFNGSLNTAISRFITYELGRNN NQRLNKVFSSSLSILFIFALVIFILGETVGLWAVNCRMVFPADRMNAVNWVYQISLMTFLVSLLNVAYTATLTAHENFRV LATVEILLTGVKVICVILLYYAPMDRLIYFAGYCFLLTLASSGFYALYCSRHYSSCRYRAILDKPFLKEMGAFYSWNLFG SIAWLLKGAGINVVINLFFGVLINAAQAVASQVSSGVTSLMGSFSSAMQPQITKSYAAGDYEHMWKLVFNGTRYSFFLLA VFMLPLCFNIDFILSLWLKEIPAYTNIFVILLLANVLAESYSTYLITVLLATGKIALYQASVGTILLLNVPLSYLVFQWG FPPVSFLIVSIVLTIMALIMRLWLLKKMLRFSVLSFLKQVVLKTVSASLLICLVNCAIYLLLPDMYGKRIIFLLSTSLLS ILLTYLTGLNNQEKILILQQLKKRITSLIHS
Sequences:
>Translated_511_residues MAEENSNKRIARNTMLLYTRSLVNLVIGLYTSRLTLDALGIADYGIYNVVGSLVALFGLFNGSLNTAISRFITYELGRNN NQRLNKVFSSSLSILFIFALVIFILGETVGLWAVNCRMVFPADRMNAVNWVYQISLMTFLVSLLNVAYTATLTAHENFRV LATVEILLTGVKVICVILLYYAPMDRLIYFAGYCFLLTLASSGFYALYCSRHYSSCRYRAILDKPFLKEMGAFYSWNLFG SIAWLLKGAGINVVINLFFGVLINAAQAVASQVSSGVTSLMGSFSSAMQPQITKSYAAGDYEHMWKLVFNGTRYSFFLLA VFMLPLCFNIDFILSLWLKEIPAYTNIFVILLLANVLAESYSTYLITVLLATGKIALYQASVGTILLLNVPLSYLVFQWG FPPVSFLIVSIVLTIMALIMRLWLLKKMLRFSVLSFLKQVVLKTVSASLLICLVNCAIYLLLPDMYGKRIIFLLSTSLLS ILLTYLTGLNNQEKILILQQLKKRITSLIHS >Mature_510_residues AEENSNKRIARNTMLLYTRSLVNLVIGLYTSRLTLDALGIADYGIYNVVGSLVALFGLFNGSLNTAISRFITYELGRNNN QRLNKVFSSSLSILFIFALVIFILGETVGLWAVNCRMVFPADRMNAVNWVYQISLMTFLVSLLNVAYTATLTAHENFRVL ATVEILLTGVKVICVILLYYAPMDRLIYFAGYCFLLTLASSGFYALYCSRHYSSCRYRAILDKPFLKEMGAFYSWNLFGS IAWLLKGAGINVVINLFFGVLINAAQAVASQVSSGVTSLMGSFSSAMQPQITKSYAAGDYEHMWKLVFNGTRYSFFLLAV FMLPLCFNIDFILSLWLKEIPAYTNIFVILLLANVLAESYSTYLITVLLATGKIALYQASVGTILLLNVPLSYLVFQWGF PPVSFLIVSIVLTIMALIMRLWLLKKMLRFSVLSFLKQVVLKTVSASLLICLVNCAIYLLLPDMYGKRIIFLLSTSLLSI LLTYLTGLNNQEKILILQQLKKRITSLIHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57317; Mature: 57186
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEENSNKRIARNTMLLYTRSLVNLVIGLYTSRLTLDALGIADYGIYNVVGSLVALFGLF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGSLNTAISRFITYELGRNNNQRLNKVFSSSLSILFIFALVIFILGETVGLWAVNCRMVF CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC PADRMNAVNWVYQISLMTFLVSLLNVAYTATLTAHENFRVLATVEILLTGVKVICVILLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH YAPMDRLIYFAGYCFLLTLASSGFYALYCSRHYSSCRYRAILDKPFLKEMGAFYSWNLFG HCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHCCHHHHHCCCHHHHHHHH SIAWLLKGAGINVVINLFFGVLINAAQAVASQVSSGVTSLMGSFSSAMQPQITKSYAAGD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC YEHMWKLVFNGTRYSFFLLAVFMLPLCFNIDFILSLWLKEIPAYTNIFVILLLANVLAES HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YSTYLITVLLATGKIALYQASVGTILLLNVPLSYLVFQWGFPPVSFLIVSIVLTIMALIM HHHHHHHHHHHHCCEEEEEECCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RLWLLKKMLRFSVLSFLKQVVLKTVSASLLICLVNCAIYLLLPDMYGKRIIFLLSTSLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH ILLTYLTGLNNQEKILILQQLKKRITSLIHS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEENSNKRIARNTMLLYTRSLVNLVIGLYTSRLTLDALGIADYGIYNVVGSLVALFGLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGSLNTAISRFITYELGRNNNQRLNKVFSSSLSILFIFALVIFILGETVGLWAVNCRMVF CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC PADRMNAVNWVYQISLMTFLVSLLNVAYTATLTAHENFRVLATVEILLTGVKVICVILLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH YAPMDRLIYFAGYCFLLTLASSGFYALYCSRHYSSCRYRAILDKPFLKEMGAFYSWNLFG HCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHCCHHHHHCCCHHHHHHHH SIAWLLKGAGINVVINLFFGVLINAAQAVASQVSSGVTSLMGSFSSAMQPQITKSYAAGD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC YEHMWKLVFNGTRYSFFLLAVFMLPLCFNIDFILSLWLKEIPAYTNIFVILLLANVLAES HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YSTYLITVLLATGKIALYQASVGTILLLNVPLSYLVFQWGFPPVSFLIVSIVLTIMALIM HHHHHHHHHHHHCCEEEEEECCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RLWLLKKMLRFSVLSFLKQVVLKTVSASLLICLVNCAIYLLLPDMYGKRIIFLLSTSLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH ILLTYLTGLNNQEKILILQQLKKRITSLIHS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA