| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735103
Identifier: 187735103
GI number: 187735103
Start: 706806
End: 707312
Strand: Reverse
Name: 187735103
Synonym: Amuc_0597
Alternate gene names: NA
Gene position: 707312-706806 (Counterclockwise)
Preceding gene: 187735106
Following gene: 187735099
Centisome position: 26.55
GC content: 53.06
Gene sequence:
>507_bases ATGATGAAAAAGATTGAACCAAAGGAGATTCAGGATAATGCCGTACAATTGATTGGGGACGATTGGATGCTGGTGACGGC GGGTTCTCCGGAGCATTTCAACATGATGACGGCCAGTTGGGGCGGTTTGGGGTTCATGTGGAAGAAGCCTGTGGCGTTTG TAGTTATCCGCCCCCAGCGCCATACCTTCCGTTTTATTGAGGCCGGGGACGAGCTGACGCTTTCCTTTTTCAGCCATGAG TACCATAAGGCTCTGACCGTGTGCGGAACAACGAGCGGACTGGATACGGACAAGGTGGCCGCTTCCGGCCTGACGCCATA CGTGACGGAGAACGGCAATGTAAGTTTTACGGAAGCGCGCCTGGTGCTGGAGTGCCGCAAGCTGTACGCGGAGCCTCTCA ACCCGGAAGCTTTTCTGGATAAATCTATTGTGCCGGAGTGGTATGCCGCCGGGGATTTCCATAAGATGTATATTGTGGAA ATCCTGAACGTATGGGTGAAGGAATAG
Upstream 100 bases:
>100_bases CGGGGACGGAATTTGTTTTCCCGCGTCATCCCGGCCTCTCCACAGCTTTGACATATGGGAGGAGGGGTGTAGGATAGTTT GCGAACGAACGTTGGAGACG
Downstream 100 bases:
>100_bases CGCCCCGGAAATGCCGCAGGCGGACGCCTGTTCGTTGTTTCTGTCCGCGCTTTTTCAGAGGGGGGCAAGGGCGCCATCCT CCAGCCGGAAGGCTGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MMKKIEPKEIQDNAVQLIGDDWMLVTAGSPEHFNMMTASWGGLGFMWKKPVAFVVIRPQRHTFRFIEAGDELTLSFFSHE YHKALTVCGTTSGLDTDKVAASGLTPYVTENGNVSFTEARLVLECRKLYAEPLNPEAFLDKSIVPEWYAAGDFHKMYIVE ILNVWVKE
Sequences:
>Translated_168_residues MMKKIEPKEIQDNAVQLIGDDWMLVTAGSPEHFNMMTASWGGLGFMWKKPVAFVVIRPQRHTFRFIEAGDELTLSFFSHE YHKALTVCGTTSGLDTDKVAASGLTPYVTENGNVSFTEARLVLECRKLYAEPLNPEAFLDKSIVPEWYAAGDFHKMYIVE ILNVWVKE >Mature_168_residues MMKKIEPKEIQDNAVQLIGDDWMLVTAGSPEHFNMMTASWGGLGFMWKKPVAFVVIRPQRHTFRFIEAGDELTLSFFSHE YHKALTVCGTTSGLDTDKVAASGLTPYVTENGNVSFTEARLVLECRKLYAEPLNPEAFLDKSIVPEWYAAGDFHKMYIVE ILNVWVKE
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19050; Mature: 19050
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKIEPKEIQDNAVQLIGDDWMLVTAGSPEHFNMMTASWGGLGFMWKKPVAFVVIRPQR CCCCCCCCHHCCCEEEEECCCEEEEECCCCCCCEEEEECCCCCCCEECCCEEEEEECCCC HTFRFIEAGDELTLSFFSHEYHKALTVCGTTSGLDTDKVAASGLTPYVTENGNVSFTEAR CEEEEEECCCEEEEEEHHHHHHHEEEEECCCCCCCCCHHHHCCCCCEEECCCCEEHHHHH LVLECRKLYAEPLNPEAFLDKSIVPEWYAAGDFHKMYIVEILNVWVKE HHHHHHHHHCCCCCCHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MMKKIEPKEIQDNAVQLIGDDWMLVTAGSPEHFNMMTASWGGLGFMWKKPVAFVVIRPQR CCCCCCCCHHCCCEEEEECCCEEEEECCCCCCCEEEEECCCCCCCEECCCEEEEEECCCC HTFRFIEAGDELTLSFFSHEYHKALTVCGTTSGLDTDKVAASGLTPYVTENGNVSFTEAR CEEEEEECCCEEEEEEHHHHHHHEEEEECCCCCCCCCHHHHCCCCCEEECCCCEEHHHHH LVLECRKLYAEPLNPEAFLDKSIVPEWYAAGDFHKMYIVEILNVWVKE HHHHHHHHHCCCCCCHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA