| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735099
Identifier: 187735099
GI number: 187735099
Start: 702450
End: 704291
Strand: Reverse
Name: 187735099
Synonym: Amuc_0593
Alternate gene names: NA
Gene position: 704291-702450 (Counterclockwise)
Preceding gene: 187735103
Following gene: 187735096
Centisome position: 26.44
GC content: 57.17
Gene sequence:
>1842_bases ATGGCCCAGCTCAAGCACCCGAAGATGGTGGACATCAGAGACATTTTGGACGAGAATACGCGTCTGCCTGCTCTGGTGGC CGCGTCCGCCGAAAAGCTGCTGGGCCTGGAACGCCTGAACAAGGCTTATGACAAGATCGTGCGCGACAAGGAGTCCGGTT CTCAGGAAAATTTCTTTCAGCTTGCCTCCAGGCATTTGAATCTGAAGCTTCAGCTGCGCCCGGGGGACCTGGAAAATATT CCTAAGAAAGGGCCTGTCGTCGTCGTCGCCAATCATCCGCACGGCTTGTCGGACGGCATCATGTTCGGGGAGCTGCTTAC CCGCGTAAGGGAGGATGTCCGCATCCTGGTCAACGAGCAGCTTTCCCTGTGCGGGGAGCTGGATCCCTGGCTCATCAAGG TGGACGTGTATGAGGATGAGAACGCCCGGCGCAAAAACCTTTCCGGCATGCGCAAGATGATTTCCTGGCTGCGGCAGGGC GGGGTTCTGGGCATTTTCCCCGCCGGCACGGTCTCCAGCTTTTCCCTGGCCCACAAAAGGGTGACGGACGACCCCTGGAA CGCGAATATCGCCGCCATTATCCGCATGACGAAAGCGACGGTGGTGCCCGTATATTTCCCGGGGCGCAACAGCCTGCTGT TCCAGGGCATTTCCCTGATCAACCGCAAGGCGCGCGTGGCGTTCCTTCCCCGTGAAGTGGGTCGGGACGGCCGCCGGACA CACCGCATTGTGGTAGGCAAGCCCATTCCGTTCAGCCAGCTTGGACAATATGATTCCGATGAAGCCATCGTCTCCCATCT GCGCCTGCGCACCTATCTGCTGGGCAAAAGTTATGAAAAAAGCCGCCGCCCCCATGTGCACAAAAAGGACCGGAAGGCGA AGATGGCCGCGCTGACCTCCCCCGTTTCCGTGCAGGATATGCAGGCGGAAATCGACGCGCTGCCCCCGGAGTGTCTGCAT GCCCGTCAGGAAAATGGAGATTGGGACGTGTACGTGGCGGATGCCCTGCAAATCCCCAATATCCTTATTGAAATAGGGCG TTTGCGGGAATATACTTTCCGCCAGGTGGGGGAAGGTTCCGGCAACGCCTGCGACCTGGATACATACGACAACCATTACA AGCACCTGTTCCTGTGGGACAGAACGCACCAGAAAATTGTGGGCGCCTACCGCATGGGGGAAACGGACAAAATCCTTGCC CGCTACGGTGTGAAAGGGTTGTACAACGGGGAATACTTTTCCTTTTCCCCTGCCGCTTTGCGGGTGCTGGACCGCTCTCT GGAAATGGGGCGCGCCTTCATTGTTCCGGAATACCAGAAGAGGCCGCTGGCTCTCGGTTTCATTTGGGAGGGCATCGGCC AGTTCATGGCCCGCAACCACCATTACCGCTACCTGTTCGGCACAGTCAGCATTTCCCGGGATTACACCAACCTTTCCCGC GCCCTCATCGTCTCCTATCTGAAGGCGCATGAAATGGAGCCCGTGCTGGTGAGTGAGGTGAGGGCCTACAATCCGCCCCG TAAAGCGGACCTGAAGAGGTCGGAATCATGCATCCTCCCTCTGGGGCTGGCAGATGCCCAGGGGCTGTCCCAATTGGTCG CTGATATAGAAGAGGATGGCAAGGGTATTCCCGTATTGCTCCGCCAATATCTGAAATTGAACGGCAAAATTCTTTCCTTC AGCGTGGATAAGCATTTTGGCGACGTATTGGACTGCCTGATCCTGGTGGACATTTTCAAAACGCCGGAGCGTTCCATCAA GCGTTATCTGGGCAAAGACGCGTATGAACAGCTCCTGCCTTACATGCAGCGGGAGAAAGAGGAGGAAAAGGCGGCGGAAT AA
Upstream 100 bases:
>100_bases TGAATTGTAGCTTTGAGCCCTGTGGAAATCAAGACTGCGTTCCGAAGGGCGTTGCAAAAAGAGTTTCACTTTTTCCCGTA AATCCGTTATACAGCGGGGC
Downstream 100 bases:
>100_bases TTCCGCAGGCGTTTTGCGTGGCTCTGCCCCCGGTTCTTAACGGGCTAGCTGAAGTGCCTGTAACCTGGGGGAAGGGCGGA GGCCGTTTCCGCAGTCATTT
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Family Protein; Acyltransferase Domain-Containing Protein; Hemolysin A; Phosphate Acyltransferase Family Protein; Acyltransferase; DNA Polymerase III Subunit Alpha; Acetyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin; Sulfolipid Biosynthesis Protein SqdA
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MAQLKHPKMVDIRDILDENTRLPALVAASAEKLLGLERLNKAYDKIVRDKESGSQENFFQLASRHLNLKLQLRPGDLENI PKKGPVVVVANHPHGLSDGIMFGELLTRVREDVRILVNEQLSLCGELDPWLIKVDVYEDENARRKNLSGMRKMISWLRQG GVLGIFPAGTVSSFSLAHKRVTDDPWNANIAAIIRMTKATVVPVYFPGRNSLLFQGISLINRKARVAFLPREVGRDGRRT HRIVVGKPIPFSQLGQYDSDEAIVSHLRLRTYLLGKSYEKSRRPHVHKKDRKAKMAALTSPVSVQDMQAEIDALPPECLH ARQENGDWDVYVADALQIPNILIEIGRLREYTFRQVGEGSGNACDLDTYDNHYKHLFLWDRTHQKIVGAYRMGETDKILA RYGVKGLYNGEYFSFSPAALRVLDRSLEMGRAFIVPEYQKRPLALGFIWEGIGQFMARNHHYRYLFGTVSISRDYTNLSR ALIVSYLKAHEMEPVLVSEVRAYNPPRKADLKRSESCILPLGLADAQGLSQLVADIEEDGKGIPVLLRQYLKLNGKILSF SVDKHFGDVLDCLILVDIFKTPERSIKRYLGKDAYEQLLPYMQREKEEEKAAE
Sequences:
>Translated_613_residues MAQLKHPKMVDIRDILDENTRLPALVAASAEKLLGLERLNKAYDKIVRDKESGSQENFFQLASRHLNLKLQLRPGDLENI PKKGPVVVVANHPHGLSDGIMFGELLTRVREDVRILVNEQLSLCGELDPWLIKVDVYEDENARRKNLSGMRKMISWLRQG GVLGIFPAGTVSSFSLAHKRVTDDPWNANIAAIIRMTKATVVPVYFPGRNSLLFQGISLINRKARVAFLPREVGRDGRRT HRIVVGKPIPFSQLGQYDSDEAIVSHLRLRTYLLGKSYEKSRRPHVHKKDRKAKMAALTSPVSVQDMQAEIDALPPECLH ARQENGDWDVYVADALQIPNILIEIGRLREYTFRQVGEGSGNACDLDTYDNHYKHLFLWDRTHQKIVGAYRMGETDKILA RYGVKGLYNGEYFSFSPAALRVLDRSLEMGRAFIVPEYQKRPLALGFIWEGIGQFMARNHHYRYLFGTVSISRDYTNLSR ALIVSYLKAHEMEPVLVSEVRAYNPPRKADLKRSESCILPLGLADAQGLSQLVADIEEDGKGIPVLLRQYLKLNGKILSF SVDKHFGDVLDCLILVDIFKTPERSIKRYLGKDAYEQLLPYMQREKEEEKAAE >Mature_612_residues AQLKHPKMVDIRDILDENTRLPALVAASAEKLLGLERLNKAYDKIVRDKESGSQENFFQLASRHLNLKLQLRPGDLENIP KKGPVVVVANHPHGLSDGIMFGELLTRVREDVRILVNEQLSLCGELDPWLIKVDVYEDENARRKNLSGMRKMISWLRQGG VLGIFPAGTVSSFSLAHKRVTDDPWNANIAAIIRMTKATVVPVYFPGRNSLLFQGISLINRKARVAFLPREVGRDGRRTH RIVVGKPIPFSQLGQYDSDEAIVSHLRLRTYLLGKSYEKSRRPHVHKKDRKAKMAALTSPVSVQDMQAEIDALPPECLHA RQENGDWDVYVADALQIPNILIEIGRLREYTFRQVGEGSGNACDLDTYDNHYKHLFLWDRTHQKIVGAYRMGETDKILAR YGVKGLYNGEYFSFSPAALRVLDRSLEMGRAFIVPEYQKRPLALGFIWEGIGQFMARNHHYRYLFGTVSISRDYTNLSRA LIVSYLKAHEMEPVLVSEVRAYNPPRKADLKRSESCILPLGLADAQGLSQLVADIEEDGKGIPVLLRQYLKLNGKILSFS VDKHFGDVLDCLILVDIFKTPERSIKRYLGKDAYEQLLPYMQREKEEEKAAE
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69697; Mature: 69566
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLKHPKMVDIRDILDENTRLPALVAASAEKLLGLERLNKAYDKIVRDKESGSQENFFQ CCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LASRHLNLKLQLRPGDLENIPKKGPVVVVANHPHGLSDGIMFGELLTRVREDVRILVNEQ HHHHCCCEEEEECCCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LSLCGELDPWLIKVDVYEDENARRKNLSGMRKMISWLRQGGVLGIFPAGTVSSFSLAHKR HHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH VTDDPWNANIAAIIRMTKATVVPVYFPGRNSLLFQGISLINRKARVAFLPREVGRDGRRT CCCCCCCCCHHHEEEECCCEEEEEEECCCCCHHHHHHHHHCCCHHEEECCHHHCCCCCCC HRIVVGKPIPFSQLGQYDSDEAIVSHLRLRTYLLGKSYEKSRRPHVHKKDRKAKMAALTS CEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHCC PVSVQDMQAEIDALPPECLHARQENGDWDVYVADALQIPNILIEIGRLREYTFRQVGEGS CCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECHHHCCHHHHHHHHHHHHHHHHHCCCC GNACDLDTYDNHYKHLFLWDRTHQKIVGAYRMGETDKILARYGVKGLYNGEYFSFSPAAL CCEECCCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCEEECHHHH RVLDRSLEMGRAFIVPEYQKRPLALGFIWEGIGQFMARNHHYRYLFGTVSISRDYTNLSR HHHHHHHHCCCEEECCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHH ALIVSYLKAHEMEPVLVSEVRAYNPPRKADLKRSESCILPLGLADAQGLSQLVADIEEDG HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCC KGIPVLLRQYLKLNGKILSFSVDKHFGDVLDCLILVDIFKTPERSIKRYLGKDAYEQLLP CCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHH YMQREKEEEKAAE HHHHHHHHHHCCC >Mature Secondary Structure AQLKHPKMVDIRDILDENTRLPALVAASAEKLLGLERLNKAYDKIVRDKESGSQENFFQ CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LASRHLNLKLQLRPGDLENIPKKGPVVVVANHPHGLSDGIMFGELLTRVREDVRILVNEQ HHHHCCCEEEEECCCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LSLCGELDPWLIKVDVYEDENARRKNLSGMRKMISWLRQGGVLGIFPAGTVSSFSLAHKR HHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH VTDDPWNANIAAIIRMTKATVVPVYFPGRNSLLFQGISLINRKARVAFLPREVGRDGRRT CCCCCCCCCHHHEEEECCCEEEEEEECCCCCHHHHHHHHHCCCHHEEECCHHHCCCCCCC HRIVVGKPIPFSQLGQYDSDEAIVSHLRLRTYLLGKSYEKSRRPHVHKKDRKAKMAALTS CEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHCC PVSVQDMQAEIDALPPECLHARQENGDWDVYVADALQIPNILIEIGRLREYTFRQVGEGS CCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECHHHCCHHHHHHHHHHHHHHHHHCCCC GNACDLDTYDNHYKHLFLWDRTHQKIVGAYRMGETDKILARYGVKGLYNGEYFSFSPAAL CCEECCCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCEEECHHHH RVLDRSLEMGRAFIVPEYQKRPLALGFIWEGIGQFMARNHHYRYLFGTVSISRDYTNLSR HHHHHHHHCCCEEECCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHH ALIVSYLKAHEMEPVLVSEVRAYNPPRKADLKRSESCILPLGLADAQGLSQLVADIEEDG HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCC KGIPVLLRQYLKLNGKILSFSVDKHFGDVLDCLILVDIFKTPERSIKRYLGKDAYEQLLP CCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHH YMQREKEEEKAAE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA