| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735094
Identifier: 187735094
GI number: 187735094
Start: 696016
End: 696147
Strand: Reverse
Name: 187735094
Synonym: Amuc_0588
Alternate gene names: NA
Gene position: 696147-696016 (Counterclockwise)
Preceding gene: 187735095
Following gene: 187735093
Centisome position: 26.13
GC content: 52.27
Gene sequence:
>132_bases ATGAGACTGATCAGCTTTCTGACGCTGGCATGCGTGGCCGGCTTCCTCTCTTCATGCAGTTGTGATTGTCATAAGCCCGC GGACTTCGCTCTGAAGGATTACCAGCCTACCTCCAGCAAGCAATTCCGTTAA
Upstream 100 bases:
>100_bases ACCGTCCGGGCAAATGCCTTTGTTCCGGATTTGGAGAAAAGTAATGGTGATGAAGTAAAATTTGCTTGCCTAGGGTACTT CGTGCGGGTCTCATAGCCGC
Downstream 100 bases:
>100_bases ATTTCCTATATGTTTGAAATCCGCGAAAAACCGGAAATGGTGGAACGGGCCATGCTCGTTTCCGTTTACTTCGATCCCTC CGAGGCTGGGGAAAAACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 43
Protein sequence:
>43_residues MRLISFLTLACVAGFLSSCSCDCHKPADFALKDYQPTSSKQFR
Sequences:
>Translated_43_residues MRLISFLTLACVAGFLSSCSCDCHKPADFALKDYQPTSSKQFR >Mature_43_residues MRLISFLTLACVAGFLSSCSCDCHKPADFALKDYQPTSSKQFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4788; Mature: 4788
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 9.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 11.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLISFLTLACVAGFLSSCSCDCHKPADFALKDYQPTSSKQFR CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLISFLTLACVAGFLSSCSCDCHKPADFALKDYQPTSSKQFR CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA